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SCNpilot_cont_500_bf_scaffold_26681_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 1986..2156

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=2 Tax=Sorangium cellulosum RepID=A9GWS3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 57.0
  • Bit_score: 117
  • Evalue 5.30e-24
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 57.0
  • Bit_score: 117
  • Evalue 1.70e-24
Cold shock protein {ECO:0000313|EMBL:CAN93968.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 57.0
  • Bit_score: 117
  • Evalue 7.40e-24

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGCAGTGGGCAAGGTGAAGTGGTTCAACGACGAAAAGGGCTGGGGCTTCATCAAGCAGGACAACGGCCCCGACGTCTTCGTGCACTACTCGCAGATCTCTGGTGATGGCCGCCGCCGCCTCTTCGAGGACGAGATGGTGGAGTTCGAGATCAAGGAGGGCCCGAAGGGG
PROTEIN sequence
Length: 57
MAVGKVKWFNDEKGWGFIKQDNGPDVFVHYSQISGDGRRRLFEDEMVEFEIKEGPKG