ggKbase home page

SCNpilot_cont_500_bf_scaffold_30305_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 925..1590

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6V0_MYXXD similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 207.0
  • Bit_score: 223
  • Evalue 2.00e-55
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 207.0
  • Bit_score: 223
  • Evalue 6.40e-56
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 207.0
  • Bit_score: 223
  • Evalue 2.90e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus xanthus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTGCACGGCCAAGATGCGTGAGCCCTCGAACCGCGCCGTGTCGGTCGCGACCGAGACGGGAGCGACGGAAGCGACGGACGCTACGCGACCGCTCGATACCGACGTGAAGCAGCTGCTCGTCGAGAACCATCGCGCGTTCCTTCGCTTCCTCGAGCAACGTGTCGGTCGTCGGGATCTCGCCGAAGACATCCTCCAGGAGGCCTTTGCCCGTGGACTCGACAAGCTCGAGGGGCTGCGAGACGGCGAGGCGGTGATCCCGTGGTTCTACCGGACGCTTCGCAACGCGACCATCAACTACTACCGTCGAACGAAGGTGGCGGGTCGGGCGCTCGCGCAGTTCGCCGAGGAGATCGAGACCGCCAAAGAGACGGTCGAGATGGTGCGGGCGGAGGTCTGCTCGTGCGTGCTCCGCCTGGCCGGTACGCTCAAGCCCGAATACGCGGACGCGCTCCGGCGCGTCGAAGTCGACGGCGTCTCGATGCGGACGTTCGCCGAAGAGCGAGGCATCTCGAAGAGCAACGCGGCGGTTCGCGTCTTCCGGGCGAGGGAGGCGCTCCGCCGTCAGCTCGCCGTGTCATGCGGAACGTGCGCGGAGCACGGGTGTGTCTCGTGCACGTGTGCAATGCGCGACGATGGCGCCGGGCAGTGCGCGCCGGTGGTGTAA
PROTEIN sequence
Length: 222
MCTAKMREPSNRAVSVATETGATEATDATRPLDTDVKQLLVENHRAFLRFLEQRVGRRDLAEDILQEAFARGLDKLEGLRDGEAVIPWFYRTLRNATINYYRRTKVAGRALAQFAEEIETAKETVEMVRAEVCSCVLRLAGTLKPEYADALRRVEVDGVSMRTFAEERGISKSNAAVRVFRAREALRRQLAVSCGTCAEHGCVSCTCAMRDDGAGQCAPVV*