ggKbase home page

SCNpilot_cont_500_bf_scaffold_30500_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 2..727

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=2 Tax=Holophaga foetida DSM 6591 RepID=H1NZ76_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 230.0
  • Bit_score: 301
  • Evalue 8.40e-79
  • rbh
Marine sediment metagenome DNA, contig: S01H1_L06957 {ECO:0000313|EMBL:GAF67275.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 233.0
  • Bit_score: 307
  • Evalue 1.60e-80
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 230.0
  • Bit_score: 281
  • Evalue 2.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 726
TACGACGAGGCCGTTCGTCAACGCGTGATCGTCCTGTGGGAGGCGTCCGACCGAATCTGCGGGAAACGACAGCGGGCGCTCATCCCGATTCTGCTTCCCGCGCTCGAGAAGCATGGCCACCTGAAGCTGGACGAAGCCGTCCGCACGCGCGTGCTTGCCGCTAGCGCATCGACACTCGATAGGCTGCTGCGCGAGCCCCGAGCCACATCCGGAAGGAAGAGACGTCGGGCCGCGGCCGCCGGAGGTGTCCGCAAAAGCGTGCCCGTGCGTACGTTCGCGGATTGGAAGGACCCACCGCCAGGATTCCTGGGGGCGGACCTCGACGCCCAATGCGGGGATGTCTCCGCCGGAAGCTTCGCTCACACGCTCGTCCTCACCGATGTCGCAAGCGGTTGGACGGGATGCGTCGCCCTGATCGTTCGAGAGGGCGCCCTCGTGGCGGACGCGATCGAGCGCCCTCGCGAGACGATGCCGTTCCCGCTGCGTGGGATAGACACAGACAACGGCAGCGAGTTCGTGAACGAGGTGCTGCTCGCGTATTGCAGCGACCGAGGCATTGAGTTCACACTAGCGCGTCCGTATCGAAAGAACGACCAGGCTTGGGTCGAGCAGAAGAACGGAGCAGTCGTCCGACGACTGGTCGGGTACGGGCGGCTCGAAGGCGTTGCGGCCGGGCACGCGCTCGCCCGCTCGCCCGGCTGTATTCGGGGTCGCGGCTGTTCGTGA
PROTEIN sequence
Length: 242
YDEAVRQRVIVLWEASDRICGKRQRALIPILLPALEKHGHLKLDEAVRTRVLAASASTLDRLLREPRATSGRKRRRAAAAGGVRKSVPVRTFADWKDPPPGFLGADLDAQCGDVSAGSFAHTLVLTDVASGWTGCVALIVREGALVADAIERPRETMPFPLRGIDTDNGSEFVNEVLLAYCSDRGIEFTLARPYRKNDQAWVEQKNGAVVRRLVGYGRLEGVAAGHALARSPGCIRGRGCS*