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SCNpilot_cont_500_bf_scaffold_29118_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 235..885

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2P1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 208.0
  • Bit_score: 132
  • Evalue 6.10e-28
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 208.0
  • Bit_score: 132
  • Evalue 1.90e-28
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN95671.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 208.0
  • Bit_score: 132
  • Evalue 8.50e-28

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGCAGTCCCTCGTTGCTTCCGATGCGGACGCGAAGCTCCTCTCGAGACGAGAGGAGCATGAGGTGACCTCCATCGGCGACCCCACGCGAGCTTCGCACGTGGCCCATAGCCCTTCATCCAGGGAACGGATGGTGGAGATCGTGCGGCTCAATTTCGACGCCGCCTGGCAGTTCGCACGCCGCCTCGGGGTGCGTCCGAACGACATCGAGGACGCCGTCCAGCAGGTCTTCCTCATCGTCGCCGAGCGGCTCGACGCGATCGAGCCGGGGAGGGAGCGCTCGTTCGTCTTCGGCATCACCCTCCGCGTGGTCCATAAGCTCCGTTACGCGCGCGCTACCCGACCTCTCGTCGCGGGAGAGCCGTTGGAGGCCGTCGATCCGTCTCCCACACCGGAGGAGCTCGCTCATCGAAAGAGCGAGCGCGAGCGGATCGAGCGCATTCTCGGAGAGATGCCGCACAAGCTTCGCGAGGTCTTCGTCCTCTACGAGCTCGAACGCCTCTCCGTACCCGAGGTCGCGGACCTGCTCGGCGTCCCGGAGGGAACCGTGGCTTCTCGCCTGAGCCGCGCTCGCGACGAGTTTCGGCGTCTGGTCCGCCGCGAGGACACGATTCGACGAGCAAGCTCGCGACGGTTGGAGGAAGAGCAATGA
PROTEIN sequence
Length: 217
VQSLVASDADAKLLSRREEHEVTSIGDPTRASHVAHSPSSRERMVEIVRLNFDAAWQFARRLGVRPNDIEDAVQQVFLIVAERLDAIEPGRERSFVFGITLRVVHKLRYARATRPLVAGEPLEAVDPSPTPEELAHRKSERERIERILGEMPHKLREVFVLYELERLSVPEVADLLGVPEGTVASRLSRARDEFRRLVRREDTIRRASSRRLEEEQ*