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SCNpilot_cont_500_bf_scaffold_41875_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 721..1380

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat domain containing protein n=1 Tax=Haemonchus contortus RepID=U6P974_HAECO similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 190.0
  • Bit_score: 107
  • Evalue 1.60e-20
Collagen triple helix repeat domain containing protein {ECO:0000313|EMBL:CDJ89321.1}; TaxID=6289 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus.;" source="Haemonchus contortus (Barber pole worm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 190.0
  • Bit_score: 107
  • Evalue 2.30e-20
putative collagen-like protein similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 222.0
  • Bit_score: 96
  • Evalue 1.50e-17

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Taxonomy

Haemonchus contortus → Haemonchus → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 660
ATGCTCCACGCTCGTGTTCCGGCCGCCCTCACGTTTCTCCTCTTCTCCGCGCTTCAGCTCGGCATCAGCGGATGTGGTGACGGTGAACATCCGGCCGTCGCCGAGCCGGGGCACGGCCCCATCACGAACATCTCCATCGGCGAGGACCCCGGCGCGCGCGGAAACCTGTCGAAGGCGTGGAGCTACACATCGACGAGCGAAGAGCCCGGCGCGATCGAAGGAGGCGGTGCACCAGCAGGCGCCGGTGCACCAGCAGGCGCCGGTGCACCGGCAGGCGCGGGCGCTGCAGCAGGTGGCGCGCCGCCGGCGCCGTTGCCATTCGGCGGTGGAGGGATCGGAACCGGCGGCGGCTCCGGCGTCGGGACCGGACGCGACAGCAGCGGCGGGATCCCTGGAGCGGCCGGAGCGGGCGCCGGAGGCCTCGGCGGCGGAACGGGCAACTTGCCCTACGCGCCCGCCGGCGGCCTCTCGGGGGTCGGCGGCAGCACCGTCGGCACCGGTCGCGGTACGAGCGGAACGCCTGGCGGCGCGGGCCTCGGCGCGTCGGGCAACGGCGACCCGACGTTCGGCACCGGCGGTCCTTCCGGCGAGAGCAGCCTCAACCCGACGCCTCCCAGCGGCGGCGCTCCTGCGGGCAGGATCGTGATCGAGGGCTACTGA
PROTEIN sequence
Length: 220
MLHARVPAALTFLLFSALQLGISGCGDGEHPAVAEPGHGPITNISIGEDPGARGNLSKAWSYTSTSEEPGAIEGGGAPAGAGAPAGAGAPAGAGAAAGGAPPAPLPFGGGGIGTGGGSGVGTGRDSSGGIPGAAGAGAGGLGGGTGNLPYAPAGGLSGVGGSTVGTGRGTSGTPGGAGLGASGNGDPTFGTGGPSGESSLNPTPPSGGAPAGRIVIEGY*