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SCNpilot_cont_500_bf_scaffold_51139_4

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(1699..1875)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 2.10e-07
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 56.0
  • Bit_score: 67
  • Evalue 9.10e-09
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 6.60e-08

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 177
AGCCGCGTCTTCGCCTCGCTCGACGAGGACAAGCAAGCCGTCTTCCTCCTGTACGAGATCGAAGAGATGTCGATGCGCGAAGTCGCCGAAGCCGTCCAATGTCCCCTGAAGACCGCCTACGCCCGATACCATGCTGCGCGCCGCGAGCTCTCACGGGCGCTCGGAGAGGCGACATGA
PROTEIN sequence
Length: 59
SRVFASLDEDKQAVFLLYEIEEMSMREVAEAVQCPLKTAYARYHAARRELSRALGEAT*