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SCNpilot_cont_500_bf_scaffold_55802_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: comp(1012..1194)

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHJ5_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 67
  • Evalue 3.90e-09
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04610.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 51.0
  • Bit_score: 71
  • Evalue 5.00e-10
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 67
  • Evalue 1.20e-09

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
GCCCTCGACGCGCTGCCGGTCGAGCAGAGGTTCACCGTCGTTCTCCACCACGTGCTCGGCATGAGCGCCGCCGAGGTCGCCGAAGAGATGGACGTGCCGCTCGAGACGGCCCGAAGCCGCCTGCGTCTGGGAATGCAGCATCTGCGTCGCCAGATGGACGCGAAAGAGGGAGACTCGCGATGA
PROTEIN sequence
Length: 61
ALDALPVEQRFTVVLHHVLGMSAAEVAEEMDVPLETARSRLRLGMQHLRRQMDAKEGDSR*