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SCNpilot_cont_500_bf_scaffold_62704_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Location: 507..1331

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RVE2_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 299.0
  • Bit_score: 174
  • Evalue 1.80e-40
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYF03725.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 294.0
  • Bit_score: 217
  • Evalue 3.30e-53
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 315.0
  • Bit_score: 179
  • Evalue 1.30e-42

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGACCTGAACCATGTCTCGGCTTTCGTTCGTGTCGTCCAAGACGGTAGCTTCACCGCCGCGGCGCGGACGCTCGGTCTTCCGAAGTCCTCCGTCAGTCGGAGCATCGCGCAGCTCGAACAGGACCTCGGCGTGCGCCTCCTTCACCGGACGACGCGCAAGCTCCATCTCACCGACGCCGGAGCGACGTTCCACGATCGCGTGTCGCGTGCGCTCGCCGACATCGACGAAGCGACGAGCGCCGCCTCCGACCTCCAGCCCGGCCGCATCGTCGATCTCGTCGCCGAGGGCTTCGATCTGGCCGTCCGCGCAGGACCGGTGCGAGACGAGAGTCTCATCGCGCGTCGCACGGGCGCCCTCGAGCTCGGGCTCTACGCGTCGTCCCGCTACGTGGCGCGTCGCGGAGCACCGAAGACACTCGAGGAGCTCCAGGACCACGACTGCATCGTGCTTCGCACGGACACGGGGACGATGGCGTGGGCGTTGTCGTCGACGTCGGGGGTCGAGCGGACCATCGAGCCCCGCGGCGCGATTTCCGCCGACGACATCTCGTTCATCAAGAAGGCCGTGCTGGCAGGAGGAGGCATCGCGCTGTTGCCGACGTTCGTCGTGCCGCGCGAAGAGGAGGCGGGCAAGCTCGTGAGGATGCTGCCGGATTGGCGCCTGGCGGGATCAGCGCTCCATGTCGTCTATCCGTCGGCGCGTTATGTCCCGCAGCGTGTCGTCGCCTTCCGCGACTACCTGATCCAGGAGCTTGCGAAGATCTCGAGCCGCTGCGAGGCGGCGAGCCTCACTCGCGACCGAAGCAAAGCAGGGCGCGGGTAG
PROTEIN sequence
Length: 275
MDLNHVSAFVRVVQDGSFTAAARTLGLPKSSVSRSIAQLEQDLGVRLLHRTTRKLHLTDAGATFHDRVSRALADIDEATSAASDLQPGRIVDLVAEGFDLAVRAGPVRDESLIARRTGALELGLYASSRYVARRGAPKTLEELQDHDCIVLRTDTGTMAWALSSTSGVERTIEPRGAISADDISFIKKAVLAGGGIALLPTFVVPREEEAGKLVRMLPDWRLAGSALHVVYPSARYVPQRVVAFRDYLIQELAKISSRCEAASLTRDRSKAGRG*