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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_CONT_500_BF_Deltaproteobacteria_69_4
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 3.96 Longest contig: 11.59 Kbp Bin length: 5.04 Mbp GC content: 68.68 %
Contigs count: 2420 Features count: 6126 rRNAs count: 0 tRNAs count: 13

Genome completeness

partial RP 28 / 55 MC: 2 BSCG 23 / 51 MC: 3 ASCG 5 / 38
Displaying items 101-150 of 2420 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_14769
Domain: Bacteria (100%)
5 4022 bp 71.88 3.67 100.25
SCNpilot_cont_500_bf_scaffold_53615
Species: Sorangium cellulosum (50%)
2 1236 bp 73.87 4.05 100.24
SCNpilot_cont_500_bf_scaffold_52438
Species: Arthrobacter crystallopoietes (50%)
2 1257 bp 69.13 3.58 100.24
SCNpilot_cont_500_bf_scaffold_21598 3 2532 bp 63.51 4.25 100.24
SCNpilot_cont_500_bf_scaffold_17446
Species: Sorangium cellulosum (50%)
4 2960 bp 68.92 2.96 100.24
SCNpilot_cont_500_bf_scaffold_36171
Species: Thioploca ingrica (50%)
2 1697 bp 68.59 4.42 100.24
SCNpilot_cont_500_bf_scaffold_50313
Species: Sorangium cellulosum (50%)
2 1299 bp 71.29 3.27 100.23
SCNpilot_cont_500_bf_scaffold_48994
Species: Sandaracinus amylolyticus (50%)
2 1326 bp 64.33 3.77 100.23
SCNpilot_cont_500_bf_scaffold_48593
Species: Verrucomicrobia bacterium IMCC26134 (50%)
2 1335 bp 68.99 3.93 100.23
SCNpilot_cont_500_bf_scaffold_48306
Species: Chondromyces apiculatus (50%)
2 1341 bp 67.93 4.10 100.22
SCNpilot_cont_500_bf_scaffold_47818
Species: uncultured bacterium A1Q1_fos_1807 (50%)
2 1353 bp 66.30 5.91 100.22
SCNpilot_cont_500_bf_scaffold_19230
Species: Chondromyces apiculatus (66.67%)
3 2757 bp 70.80 3.63 100.22
SCNpilot_cont_500_bf_scaffold_31876
Species: Chloroflexus aggregans (50%)
2 1874 bp 68.46 4.27 100.21
SCNpilot_cont_500_bf_scaffold_26574
Species: Sorangium cellulosum (66.67%)
3 3293 bp 73.22 4.48 100.21
SCNpilot_cont_500_bf_scaffold_82945
Species: Sandaracinus amylolyticus (100%)
2 1494 bp 68.21 3.85 100.20
SCNpilot_cont_500_bf_scaffold_41763
Species: Thioploca ingrica (50%)
2 1512 bp 69.38 3.47 100.20
SCNpilot_cont_500_bf_scaffold_41187
Species: RBG_13_Chloroflexi_53_26_curated (50%)
2 1530 bp 68.43 2.61 100.20
SCNpilot_cont_500_bf_scaffold_28414
Species: Haliangium ochraceum (50%)
2 2051 bp 70.79 3.41 100.20
SCNpilot_cont_500_bf_scaffold_39981
Species: Corallococcus coralloides (50%)
2 1566 bp 72.80 3.67 100.19
SCNpilot_cont_500_bf_scaffold_63992
Species: Sorangium cellulosum (50%)
2 1054 bp 67.55 2.85 100.19
SCNpilot_cont_500_bf_scaffold_19909
Domain: Bacteria (66.67%)
3 2683 bp 63.32 2.80 100.19
SCNpilot_cont_500_bf_scaffold_19497
Order: Myxococcales (66.67%)
3 2728 bp 66.02 5.32 100.18
SCNpilot_cont_500_bf_scaffold_37620
Species: Chondromyces apiculatus (100%)
2 1644 bp 67.94 4.41 100.18
SCNpilot_cont_500_bf_scaffold_37393
Species: Chloroflexus aggregans (50%)
2 1653 bp 65.58 2.72 100.18
SCNpilot_cont_500_bf_scaffold_60274
Species: Geobacter sulfurreducens (50%)
2 1117 bp 70.19 3.80 100.18
SCNpilot_cont_500_bf_scaffold_35524
Species: Chondromyces apiculatus (50%)
2 1722 bp 66.78 5.08 100.17
SCNpilot_cont_500_bf_scaffold_57775
Species: Chondromyces apiculatus (50%)
2 1159 bp 70.66 3.45 100.17
SCNpilot_cont_500_bf_scaffold_56435
Species: Nitrosococcus halophilus (50%)
2 1183 bp 68.30 4.02 100.17
SCNpilot_cont_500_bf_scaffold_33808
Species: Sorangium cellulosum (50%)
2 2372 bp 66.95 3.16 100.17
SCNpilot_cont_500_bf_scaffold_54859
Species: Chondromyces apiculatus (50%)
2 1213 bp 64.55 4.12 100.16
SCNpilot_cont_500_bf_scaffold_54223
Species: Thioploca ingrica (50%)
2 1225 bp 66.20 2.45 100.16
SCNpilot_cont_500_bf_scaffold_53691
Species: Thioflavicoccus mobilis (50%)
2 1234 bp 69.94 4.86 100.16
SCNpilot_cont_500_bf_scaffold_53698
Species: Haliangium ochraceum (50%)
2 1234 bp 66.86 3.85 100.16
SCNpilot_cont_500_bf_scaffold_32350
Species: Sorangium cellulosum (50%)
2 1854 bp 69.80 3.78 100.16
SCNpilot_cont_500_bf_scaffold_53384
Species: RBG_13_Chloroflexi_53_26_curated (50%)
2 1240 bp 69.44 3.63 100.16
SCNpilot_cont_500_bf_scaffold_53047
Species: Myxococcus xanthus (50%)
2 1246 bp 72.07 3.61 100.16
SCNpilot_cont_500_bf_scaffold_30817
Species: Chondromyces apiculatus (50%)
2 1923 bp 65.68 3.77 100.16
SCNpilot_cont_500_bf_scaffold_46906
Species: Eimeria maxima (50%)
2 1923 bp 72.13 4.94 100.16
SCNpilot_cont_500_bf_scaffold_50982
Species: Sorangium cellulosum (100%)
2 1285 bp 68.02 3.70 100.16
SCNpilot_cont_500_bf_scaffold_30534
Species: Corallococcus coralloides (50%)
2 1938 bp 67.80 3.61 100.16
SCNpilot_cont_500_bf_scaffold_11862
Species: Haliangium ochraceum (66.67%)
3 3924 bp 71.51 4.08 100.15
SCNpilot_cont_500_bf_scaffold_49384
Species: Physcomitrella patens (50%)
2 1318 bp 65.40 3.03 100.15
SCNpilot_cont_500_bf_scaffold_48531
Species: Sandaracinus amylolyticus (50%)
2 1336 bp 65.64 2.62 100.15
SCNpilot_cont_500_bf_scaffold_47906
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 1351 bp 69.73 3.89 100.15
SCNpilot_cont_500_bf_scaffold_19554
Species: Chondromyces apiculatus (50%)
2 2720 bp 66.51 3.68 100.15
SCNpilot_cont_500_bf_scaffold_76666
Species: Candidatus Accumulibacter sp. SK-02 (50%)
2 1384 bp 71.89 3.61 100.15
SCNpilot_cont_500_bf_scaffold_46568
Species: Sorangium cellulosum (50%)
2 1384 bp 67.56 3.79 100.15
SCNpilot_cont_500_bf_scaffold_46366
Species: Chondromyces apiculatus (50%)
2 1390 bp 64.82 2.16 100.14
SCNpilot_cont_500_bf_scaffold_44570
Species: Sorangium cellulosum (50%)
2 1435 bp 71.43 4.53 100.14
SCNpilot_cont_500_bf_scaffold_26550
Species: Sorangium cellulosum (50%)
2 2163 bp 71.66 3.58 100.14
Displaying items 101-150 of 2420 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.