ggKbase home page

SCNpilot_cont_500_bf_scaffold_59181_1

Organism: SCNPILOT_CONT_500_P_Alphaproteobacteria_novel_41_6_7

partial RP 3 / 55 MC: 1 BSCG 8 / 51 MC: 2 ASCG 2 / 38
Location: 2..271

Top 3 Functional Annotations

Value Algorithm Source
id=4799280 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 84.0
  • Bit_score: 81
  • Evalue 5.10e-13
hypothetical protein; K09159 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 85.0
  • Bit_score: 75
  • Evalue 1.10e-11
TPR repeat region superfamily protein {ECO:0000313|EMBL:EEA96799.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 85.0
  • Bit_score: 75
  • Evalue 3.90e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudovibrio sp. JE062 → Pseudovibrio → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
AATGATATCGAAATTTTAAAAAAGCGCCTCCTTTACCAAAGCCAACATCGGGGAATGCGAGAGATGGACTGGCTTTTAGGAGGTTTTGCACAAAAGCATATCGGGACGATGTTGCCTGAAGAGCTATACCAATTTGAGGCTCTACTTACTTTTTTGGACCAGGAGCTTTATGGTTGGTTTTTTGAAAAAATGCCCATTCCAGAACATGCACCACAAGATCTAATCACAAAAATCTTCCTCACTCTTCAAGAGGATAGGCTGATTCATTGA
PROTEIN sequence
Length: 90
NDIEILKKRLLYQSQHRGMREMDWLLGGFAQKHIGTMLPEELYQFEALLTFLDQELYGWFFEKMPIPEHAPQDLITKIFLTLQEDRLIH*