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SCNPILOT_CONT_500_P_Alphaproteobacteria_novel_41_6_7

SCNPILOT_CONT_500_BF_Bacteria_39_4
In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 3.54 Longest contig: 4.19 Kbp Bin length: 396.99 Kbp GC content: 39.32 %
Contigs count: 271 Features count: 559 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 3 / 55 MC: 1 BSCG 8 / 51 MC: 2 ASCG 2 / 38
Displaying items 101-150 of 271 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_59670
Species: Candidatus Caedibacter acanthamoebae (100%)
2 1127 bp 34.43 2.44 98.49
SCNpilot_cont_500_bf_scaffold_52712
Species: uncultured bacterium (50%)
2 1252 bp 37.86 3.00 88.42
SCNpilot_cont_500_bf_scaffold_63875
Species: R_Alphaproteobacteria_42_30 (50%)
2 1056 bp 42.61 2.37 85.23
SCNpilot_cont_500_bf_scaffold_30553
Species: uncultured bacterium (50%)
2 1936 bp 43.03 3.36 95.92
SCNpilot_cont_500_bf_scaffold_63890
Species: uncultured bacterium (50%)
2 1056 bp 44.98 2.84 99.72
SCNpilot_cont_500_bf_scaffold_66227
Species: R_Alphaproteobacteria_42_30 (50%)
2 1018 bp 41.45 2.46 87.82
SCNpilot_cont_500_bf_scaffold_30567
Species: Neisseria sp. GT4A_CT1 (50%)
2 1935 bp 40.47 3.49 80.31
SCNpilot_cont_500_bf_scaffold_52987
Species: Candidatus Caedibacter acanthamoebae (50%)
2 1247 bp 41.78 3.61 72.17
SCNpilot_cont_500_bf_scaffold_63892
Species: R_Alphaproteobacteria_42_30 (50%)
2 1056 bp 43.28 2.84 79.55
SCNpilot_cont_500_bf_scaffold_59181
Species: Pseudovibrio sp. JE062 (50%)
2 1135 bp 41.06 2.64 102.55
SCNpilot_cont_500_bf_scaffold_48982 2 1327 bp 30.75 4.14 69.40
SCNpilot_cont_500_bf_scaffold_55030
Species: Legionella massiliensis (50%)
2 1209 bp 37.88 3.72 93.05
SCNpilot_cont_500_bf_scaffold_63382
Species: uncultured bacterium (50%)
2 1064 bp 45.49 3.29 60.06
SCNpilot_cont_500_bf_scaffold_41747
Species: R_Alphaproteobacteria_42_30 (50%)
2 1512 bp 43.19 2.65 56.94
SCNpilot_cont_500_bf_scaffold_63895
Species: R_Alphaproteobacteria_42_30 (50%)
2 1055 bp 43.79 2.61 87.87
SCNpilot_cont_500_bf_scaffold_30060
Species: Lysinibacillus varians (50%)
2 1964 bp 37.07 3.18 53.00
SCNpilot_cont_500_bf_scaffold_29694
Species: RLO_Nitrospinae_39_16 (50%)
2 1983 bp 36.06 3.66 69.89
SCNpilot_cont_500_bf_scaffold_54531
Species: Delftia sp. Cs1-4 (50%)
2 1219 bp 45.28 7.18 102.87
SCNpilot_cont_500_bf_scaffold_41501
Species: R_Alphaproteobacteria_42_30 (100%)
2 1519 bp 39.50 2.63 74.46
SCNpilot_cont_500_bf_scaffold_55809
Species: Candidatus Paracaedibacter acanthamoebae (50%)
2 1195 bp 43.35 3.77 96.40
SCNpilot_cont_500_bf_scaffold_61406
Species: Legionella longbeachae (50%)
2 1098 bp 39.34 3.19 75.41
SCNpilot_cont_500_bf_scaffold_59454
Species: RLO_Rhodospirillales_67_15 (50%)
2 1130 bp 43.72 3.32 90.00
SCNpilot_cont_500_bf_scaffold_58841
Species: Bradyrhizobium sp. ORS 278 (50%)
2 1141 bp 38.83 3.72 86.24
SCNpilot_cont_500_bf_scaffold_53572
Species: Chelativorans sp. BNC1 (50%)
2 1237 bp 41.39 3.64 96.28
SCNpilot_cont_500_bf_scaffold_65212
Species: uncultured bacterium (50%)
2 1034 bp 43.81 2.90 79.50
SCNpilot_cont_500_bf_scaffold_55820 2 1194 bp 41.04 3.35 60.05
SCNpilot_cont_500_bf_scaffold_33387
Species: uncultured bacterium (50%)
2 1808 bp 39.55 3.04 79.65
SCNpilot_cont_500_bf_scaffold_38511 2 1612 bp 43.67 4.03 75.19
SCNpilot_cont_500_bf_scaffold_63668
Species: R_Alphaproteobacteria_42_30 (100%)
2 1059 bp 42.68 4.72 100.28
SCNpilot_cont_500_bf_scaffold_61678 2 1093 bp 32.39 3.43 93.60
SCNpilot_cont_500_bf_scaffold_54050
Species: Azospirillum sp. CAG:260 (50%)
2 1228 bp 34.28 2.24 32.74
SCNpilot_cont_500_bf_scaffold_48251
Species: Candidatus Caedibacter acanthamoebae (50%)
2 1343 bp 38.50 3.72 62.77
SCNpilot_cont_500_bf_scaffold_41273
Species: R_Alphaproteobacteria_42_30 (50%)
2 1527 bp 37.92 3.27 79.76
SCNpilot_cont_500_bf_scaffold_40297
Species: R_Alphaproteobacteria_42_30 (100%)
2 1556 bp 43.89 2.57 91.20
SCNpilot_cont_500_bf_scaffold_49404 2 1318 bp 38.69 3.22 41.43
SCNpilot_cont_500_bf_scaffold_59999 2 1121 bp 43.80 9.81 115.34
SCNpilot_cont_500_bf_scaffold_51199
Species: R_Alphaproteobacteria_42_30 (50%)
2 1281 bp 45.43 3.12 74.00
SCNpilot_cont_500_bf_scaffold_60551
Species: uncultured bacterium (100%)
2 1112 bp 39.93 3.15 95.77
SCNpilot_cont_500_bf_scaffold_47995
Species: uncultured bacterium (100%)
2 1349 bp 36.62 3.52 53.60
SCNpilot_cont_500_bf_scaffold_64558
Species: R_Alphaproteobacteria_42_30 (50%)
2 1044 bp 43.01 1.92 100.00
SCNpilot_cont_500_bf_scaffold_62399
Species: Legionella pneumophila (50%)
2 1080 bp 41.39 2.55 100.28
SCNpilot_cont_500_bf_scaffold_48783
Species: R_Alphaproteobacteria_42_30 (50%)
2 1330 bp 44.81 3.01 100.15
SCNpilot_cont_500_bf_scaffold_39174
Species: uncultured bacterium (100%)
2 1591 bp 33.25 2.51 99.75
SCNpilot_cont_500_bf_scaffold_58374
Species: uncultured bacterium (50%)
2 1149 bp 41.25 3.05 84.60
SCNpilot_cont_500_bf_scaffold_62151
Species: uncultured bacterium (50%)
2 1085 bp 31.52 2.53 85.16
SCNpilot_cont_500_bf_scaffold_54847
Species: R_Alphaproteobacteria_42_30 (50%)
2 1810 bp 43.76 3.87 102.93
SCNpilot_cont_500_bf_scaffold_65512
Species: R_Alphaproteobacteria_42_30 (50%)
2 1029 bp 39.07 2.19 78.13
SCNpilot_cont_500_bf_scaffold_53363
Species: R_Alphaproteobacteria_42_30 (100%)
2 1240 bp 44.44 2.62 97.26
SCNpilot_cont_500_bf_scaffold_64315
Species: Oceanicola batsensis (50%)
2 1048 bp 32.35 2.86 69.85
SCNpilot_cont_500_bf_scaffold_52549
Species: Candidatus Caedibacter acanthamoebae (50%)
2 1255 bp 42.31 2.79 85.82
Displaying items 101-150 of 271 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.