ggKbase home page

SCNpilot_cont_500_bf_scaffold_21931_1

Organism: SCNpilot_P_inoc_Niastella_42_33

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Location: 2..922

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 303.0
  • Bit_score: 402
  • Evalue 4.80e-109
CRISPR-associated endonuclease Cas1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJM4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 303.0
  • Bit_score: 402
  • Evalue 3.40e-109
  • rbh
Putative DNA repair protein; K15342 CRISP-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 313.0
  • Bit_score: 349
  • Evalue 1.40e-93
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 921
GATAGAAGTGGTTCCGTTTTCAATCTGAAAACTGTCAATGAACAACTCGTCATTGAGACCATCCTGCCCGTTCCTCTTGTTCCTGAAGGGGAAGATAAAGAAGTCAAGACCATTGCCAAAACCATTCCCATTGAAGATATCGGCCTGCTGATCCTTGATCACCGGCAGATAACCATTACGCAGGCATTATTGTCGAAATTATTGGCGAATAATACTGCAGTGATCAGTTGTGATGAAACACATCATCCTACCGGCATGCTGTTCAATCTGGATGGTAATTCCCTTCAAAGCCAGAAATTCCAGGCACAATTGAACTCAACCATTCCGCTGAAAAAGCAATTATGGCAGCAAACGGTGATCGCCAAGATCCAAAATCAAGCAGCGGTGTTGGCCATTAGACGGGAAGAGAATAAGATGTTGCTCAGCCTGGCGAATGATGTCAGGAGTGGCGACAGTAATAACTGCGAAGCGCAGGCTGCGGCGTATTACTGGAAGCGGGTTTTCCCGGATACACTTCAATTCAGGCGGGAACGATACGGTCCGCCACCAAATAATCTACTTAATTATGGATACGCGATTCTTCGGGCTGTGGTAGCGCGCAGCTTGGTGTCCAGCGGCTTGTTGCCGACGCTGGGGATTCATCACCGGAATCAGTATAACGCGTATTGCCTCGCGGATGACATCATGGAACCGTACAGGCCGTATGCAGACCTAGTAGTGTACCAAATCGTCCGGAATAACGGCCAATATCTTGAAATGAGCCCTTCAATAAAGAAATCTCTACTTGAAATACCCGCAATGGATGTAGTCATTGATGGAAAGAAAAGCCCGTTAATGAACGCAGTACAACGTACAACAGCCAGCCTTGCGAAGTGCTATGAAGGAGTACAAAGAAAGATTCTATACCCTGCGATTGGTTAA
PROTEIN sequence
Length: 307
DRSGSVFNLKTVNEQLVIETILPVPLVPEGEDKEVKTIAKTIPIEDIGLLILDHRQITITQALLSKLLANNTAVISCDETHHPTGMLFNLDGNSLQSQKFQAQLNSTIPLKKQLWQQTVIAKIQNQAAVLAIRREENKMLLSLANDVRSGDSNNCEAQAAAYYWKRVFPDTLQFRRERYGPPPNNLLNYGYAILRAVVARSLVSSGLLPTLGIHHRNQYNAYCLADDIMEPYRPYADLVVYQIVRNNGQYLEMSPSIKKSLLEIPAMDVVIDGKKSPLMNAVQRTTASLAKCYEGVQRKILYPAIG*