ggKbase home page

SCNpilot_cont_500_bf_scaffold_66672_2

Organism: SCNpilot_P_inoc_Niastella_42_33

partial RP 11 / 55 BSCG 15 / 51 ASCG 3 / 38
Location: comp(667..1011)

Top 3 Functional Annotations

Value Algorithm Source
PhoB family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI0003644C34 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 114.0
  • Bit_score: 161
  • Evalue 4.90e-37
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 114.0
  • Bit_score: 155
  • Evalue 1.10e-35
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW03452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 114.0
  • Bit_score: 155
  • Evalue 5.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
AGGGTATTGCTTCGCCGCACGACCGACCGTCACTTTCCAACCGGTAATATATTGCGGGCTGCCGATCTTTCCCTCAACCTGGAAACTATGCAGGTGTATAGAAACGAGAAAGAAATTTCTTTAACGGCACGCGAGCTAAAGTTGCTGGAATACTTATTGAGAAATAAAAACCGTACCGTGTCCAGAGCCGATATCGCTATCAATGTCTGGGATGCCGACTTTGAAACGGAAAACAATATCATTGATGTTTATATTAATTATATCCGCAACAAAGTTGACAAGCCTTTTCCTGTAAAGCTGATCCATACACAGATAGGAATGGGCTATATATTAAAAGACAGCTAG
PROTEIN sequence
Length: 115
RVLLRRTTDRHFPTGNILRAADLSLNLETMQVYRNEKEISLTARELKLLEYLLRNKNRTVSRADIAINVWDADFETENNIIDVYINYIRNKVDKPFPVKLIHTQIGMGYILKDS*