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SCNpilot_cont_500_bf_scaffold_995_16

Organism: SCNPILOT_CONT_500_BF_Pseudonocardia_plasmid_like_70_33

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 13220..13795

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9RKI2_STRCO similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 192
  • Evalue 4.40e-46
SCE46.07c; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 192
  • Evalue 1.40e-46
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 192
  • Evalue 6.10e-46

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Taxonomy

Streptomyces coelicolor → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGACACCGAAGTGTGGTCCCCGCTTGGACGCGACGAGCTGTTCAGACGCCACGTCGTCCCGCACATCCCGACCCTGCTGCGGGCGGCGCGCGCGCTGACCGGGCAGCTCAGCGACGCCGAGGACCTCGTTCAGGACACACTGATCCGCGCCTACCGGGCCCTGCACCAGTTCGACGGAACCCACCCCCGGGCCTGGCTGCTGACCATCCTGCGCCACACCGCATCCAACAACCGCCGAAGGCAGAGCCCGAACCTGCTGCGCGACCCCGGCATCGACCTGGACGAGCTACCCCTGGCCCCACCCCACGATTCGGCCGAACGGATCGCGCTGGGCCGCGAGTTCGACACCGCGGTGAAACAGGCGGTCGATGATCTCACCGACCGCCAGCGCGCCGTCGTCATCCTCGTCGACGTACAAGGACTGTCGGTCGCCCAGGCCGCCCACCGACTCGACCTCCCGGAAGGCACCGTCATGAGCCGGCTGCACGCCGCACGGACCCGGATGCGCCACCGACTCGGCGCCGTCGGCGTCGCACCCAGACCCGGCGACGTGCCGAGACGAGCCGCCCGATGA
PROTEIN sequence
Length: 192
MDTEVWSPLGRDELFRRHVVPHIPTLLRAARALTGQLSDAEDLVQDTLIRAYRALHQFDGTHPRAWLLTILRHTASNNRRRQSPNLLRDPGIDLDELPLAPPHDSAERIALGREFDTAVKQAVDDLTDRQRAVVILVDVQGLSVAQAAHRLDLPEGTVMSRLHAARTRMRHRLGAVGVAPRPGDVPRRAAR*