ggKbase home page

SCNpilot_cont_500_bf_scaffold_46

Search features with annotation key words

Displaying items 91-120 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_46_91
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

112131..113144
DNA (1014bp) protein (338aa)
Rieske (2Fe-2S) domain protein id=2238920 bin=GWB2_Chloroflexi_49_20 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good rbh
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_500_bf_scaffold_46_92
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(113158..114669)
DNA (1512bp) protein (504aa)
O-succinylbenzoate-CoA ligase; K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26] rbh
O-succinylbenzoic acid-CoA ligase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJK0_9CHLR rbh
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_500_bf_scaffold_46_93
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

114812..115678
DNA (867bp) protein (289aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ACZ39181.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ACZ39181.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4L4_SPHTD
SCNpilot_cont_500_bf_scaffold_46_94
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

115679..116713
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4L5_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39182.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_46_95
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

116759..117751
DNA (993bp) protein (331aa)
PfkB domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B007_HERA2
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABX03714.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_46_96
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

117748..118254
DNA (507bp) protein (169aa)
RfaE bifunctional protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMY8_9CHLR
RfaE bifunctional protein {ECO:0000313|EMBL:EFH87138.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
cytidyltransferase-related domain-containing protein
SCNpilot_cont_500_bf_scaffold_46_97
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118268..118747)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI00037657A6
Transcriptional regulator {ECO:0000313|EMBL:KHL04272.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_46_98
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(119264..120088)
DNA (825bp) protein (275aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Citreicella sp. SE45 RepID=D0D297_9RHOB
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
SCNpilot_cont_500_bf_scaffold_46_99
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(120373..121005)
DNA (633bp) protein (211aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EN25_9CHLR
SCNpilot_cont_500_bf_scaffold_46_100
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

121553..124390
DNA (2838bp) protein (946aa)
ABC transporter, ATP-binding protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C481_ACAM1 rbh
ABC transporter ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABW27472.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
SCNpilot_cont_500_bf_scaffold_46_101
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(124450..126069)
DNA (1620bp) protein (540aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WA42_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY36724.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_500_bf_scaffold_46_102
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126350..127960)
DNA (1611bp) protein (537aa)
Transcriptional regulator with HTH domain and aminotransferase domain n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J3C3_DESMD
transcriptional regulator with HTH domain and aminotransferase domain
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:AFQ45476.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
SCNpilot_cont_500_bf_scaffold_46_103
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

128173..128781
DNA (609bp) protein (203aa)
Hypothetical conserved protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SHM1_9CHLR
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55657.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
N-acetyltransferase GCN5
SCNpilot_cont_500_bf_scaffold_46_104
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

128783..129349
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI000377959B
pyridoxamine 5-phosphate oxidase; K07005
Putative pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:ACO48045.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
SCNpilot_cont_500_bf_scaffold_46_105
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

130104..130559
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TL01_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH86451.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein; K09117 hypothetical protein
SCNpilot_cont_500_bf_scaffold_46_106
unknown

Not on your lists

130593..131462
DNA (870bp) protein (290aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_46_107
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

131504..132337
DNA (834bp) protein (278aa)
MscS Mechanosensitive ion channel n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB17_THET1
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACZ41982.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_46_108
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132492..133178
DNA (687bp) protein (229aa)
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1L6_CLOA9
SCNpilot_cont_500_bf_scaffold_46_109
Anoxybacillus gonensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

133168..133953
DNA (786bp) protein (262aa)
yabD; Mg-dependent DNAse; K03424 TatD DNase family protein [EC:3.1.21.-]
hydrolase TatD n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002E41FA3
Hydrolase TatD {ECO:0000313|EMBL:KGP59453.1}; TaxID=198467 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus gonensis.;"
SCNpilot_cont_500_bf_scaffold_46_110
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


133980..134414
DNA (435bp) protein (145aa)
Ribosomal protein L7/L12 n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I028_MYCRH
Ribosomal protein L7/L12 {ECO:0000313|EMBL:EHB55914.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
SCNpilot_cont_500_bf_scaffold_46_111
unknown

Not on your lists

134431..134862
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_46_112
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

134936..135880
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM30_DESK7
LysR family transcriptional regulator
Tax=RBG_16_Chloroflexi_56_8_curated
SCNpilot_cont_500_bf_scaffold_46_113
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

136093..136710
DNA (618bp) protein (206aa)
Sensor protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VRF0_9CYAN
Sensor protein {ECO:0000313|EMBL:ESA34582.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_46_114
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

136733..137347
DNA (615bp) protein (205aa)
Thiopurine S-methyltransferase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S491_9CYAN
thiopurine S-methyltransferase
Thiopurine S-methyltransferase {ECO:0000313|EMBL:AFY65023.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
SCNpilot_cont_500_bf_scaffold_46_115
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

137387..138697
DNA (1311bp) protein (437aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EF19_9CHLR rbh
SCNpilot_cont_500_bf_scaffold_46_116
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

138702..138911
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037E5A79
Hypothetical protein
Predicted protein {ECO:0000313|EMBL:EFE83624.2}; Uncharacterized protein {ECO:0000313|EMBL:AGI88243.1}; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
SCNpilot_cont_500_bf_scaffold_46_117
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(139001..140542)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XL64_9CHRO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFZ32811.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_cont_500_bf_scaffold_46_118
R_OP11_Woesebacteria_39_10b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

140839..141321
DNA (483bp) protein (161aa)
Nudix-like NDP and NTP phosphohydrolase YmfB n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L102_9GAMM
NUDIX hydrolase
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10b_curated
SCNpilot_cont_500_bf_scaffold_46_119
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(141341..141940)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B5_SPHTD
recombination protein RecR; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_46_120
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142121..142960
DNA (840bp) protein (280aa)
Short-chain dehydrogenase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W048_9CYAN rbh
short chain dehydrogenase/reductase family oxidoreductase rbh
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
Displaying items 91-120 of 180 in total

View Taxonomy