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SCNpilot_cont_500_bf_scaffold_54

Search features with annotation key words

Displaying items 91-120 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_54_91
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(108705..109646)
DNA (942bp) protein (314aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1J9_SPHTD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ38116.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_54_92
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109799..111574)
DNA (1776bp) protein (592aa)
Twin-arginine translocation pathway signal n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4Y1T1_ALCXX rbh
Twin-arginine translocation pathway signal rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AIR51808.1}; Uncharacterized protein {ECO:0000313|EMBL:EFV87290.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
SCNpilot_cont_500_bf_scaffold_54_93
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

112207..113289
DNA (1083bp) protein (361aa)
Transcriptional regulator involved in degradation (LacI family) n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5KYQ0_GEOKA
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator involved in degradation (LacI family) {ECO:0000313|EMBL:BAD76186.1}; TaxID=235909 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus (strain HTA426).;"
SCNpilot_cont_500_bf_scaffold_54_94
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113341..114039
DNA (699bp) protein (233aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ42_9RHIZ
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EYR81124.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dimethylmenaquinone methyltransferase
SCNpilot_cont_500_bf_scaffold_54_95
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114198..115511
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000368D086 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE53176.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Beta-Ala-His dipeptidase precursor, putative rbh
SCNpilot_cont_500_bf_scaffold_54_96
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115530..116255
DNA (726bp) protein (242aa)
Uncharacterized protein, putative amidase (EC:3.5.2.10)
Creatinine amidohydrolase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X983_9FIRM
Creatinine amidohydrolase {ECO:0000313|EMBL:EGJ48052.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
SCNpilot_cont_500_bf_scaffold_54_97
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(116586..117857)
DNA (1272bp) protein (424aa)
Radical SAM domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX79_9CHLR
Radical SAM domain protein {ECO:0000313|EMBL:EFH84812.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
radical SAM domain-containing protein; K06871 uncharacterized protein
SCNpilot_cont_500_bf_scaffold_54_98
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117883..119529)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI0003737999
Sulfatase {ECO:0000313|EMBL:EWS81328.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
sulfatase rbh
SCNpilot_cont_500_bf_scaffold_54_99
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(119543..121372)
DNA (1830bp) protein (610aa)
Choline-sulfatase (EC:3.1.6.6) rbh
Choline-sulfatase {ECO:0000313|EMBL:CCA59845.1}; EC=3.1.6.6 {ECO:0000313|EMBL:CCA59845.1};; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
Choline-sulfatase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RGC5_STRVP rbh
SCNpilot_cont_500_bf_scaffold_54_100
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(121462..123285)
DNA (1824bp) protein (608aa)
Extracellular solute-binding protein family 5 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV5_THET1
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ42976.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_54_101
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(123430..124488)
DNA (1059bp) protein (353aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV4_THET1
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACZ42975.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_54_102
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(124537..125652)
DNA (1116bp) protein (372aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV8_THET1
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACZ42979.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_54_103
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(125665..126786)
DNA (1122bp) protein (374aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV7_THET1 rbh
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ42978.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_54_104
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(126810..127784)
DNA (975bp) protein (325aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYQ8_HERA2
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Tax=RBG_13_Chloroflexi_48_10_curated
SCNpilot_cont_500_bf_scaffold_54_105
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

128243..128848
DNA (606bp) protein (202aa)
Putative transcriptional regulator, PadR family n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WKP3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY26614.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
Transcriptional regulator, PadR family
SCNpilot_cont_500_bf_scaffold_54_106

Not on your lists

129892..131931
DNA (2040bp) protein (680aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] rbh
DEAD/DEAH box helicase domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B466_HERA2 rbh
Helicase conserved C-terminal domain protein {ECO:0000313|EMBL:AIA15283.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_500_bf_scaffold_54_107
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(132049..133203)
DNA (1155bp) protein (385aa)
Tax=RBG_13_Chloroflexi_53_26_curated
SCNpilot_cont_500_bf_scaffold_54_108
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

133501..133782
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C726_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37787.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_54_109
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

133951..134790
DNA (840bp) protein (280aa)
Zn-dependent oxidoreductase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TRK7_9MICC
Zn-dependent oxidoreductase
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_500_bf_scaffold_54_110
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

134852..135388
DNA (537bp) protein (179aa)
flavodoxin; K00230 menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
Flavodoxin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP41_METAC
Flavodoxin {ECO:0000313|EMBL:AAM05479.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
SCNpilot_cont_500_bf_scaffold_54_111
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

135625..136611
DNA (987bp) protein (329aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEV8_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFH88557.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_54_112
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

136613..138250
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD14_THET1
hypothetical protein; K09686 antibiotic transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42679.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_54_113
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

138678..139853
DNA (1176bp) protein (392aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PBM1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KER09120.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
SCNpilot_cont_500_bf_scaffold_54_114

Not on your lists

140094..140552
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B5EDD2
Marine sediment metagenome DNA, contig: S01H1_S10702 {ECO:0000313|EMBL:GAG04575.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_500_bf_scaffold_54_115
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(140606..142882)
DNA (2277bp) protein (759aa)
FAD dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX75_9CHLR rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH84808.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_54_116
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

143377..144771
DNA (1395bp) protein (465aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus vortex V453 RepID=E5YYI0_9BACL rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:ETT42490.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_54_117
unknown

Not on your lists

144835..144969
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_54_118
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

144911..145798
DNA (888bp) protein (296aa)
ABC transporter permease n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003699666 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:AIQ66420.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
binding-protein-dependent transport systems inner membrane component rbh
SCNpilot_cont_500_bf_scaffold_54_119
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

145843..146733
DNA (891bp) protein (297aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037168B4 rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHL95942.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_54_120
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

146843..148654
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002EE70B7 rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ETT37306.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
integral membrane sensor signal transduction histidine kinase rbh
Displaying items 91-120 of 249 in total

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