ggKbase home page

SCNpilot_cont_500_bf_scaffold_77

Search features with annotation key words

Displaying items 91-120 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_77_90
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(130104..131210)
DNA (1107bp) protein (369aa)
sugar ABC transporter ATP-binding protein (EC:3.6.3.20); K10112 maltose/maltodextrin transport system ATP-binding protein
Sugar ABC transporter, ATP-binding protein, putative n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BNM0_PUNMI
Tax=RBG_16_Spirochaete_67_19_curated
SCNpilot_cont_500_bf_scaffold_77_91
Pyrobaculum aerophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(131210..132280)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EF5A29
multiple sugar-binding transport ATP-binding; K02023 multiple sugar transport system ATP-binding protein
Multiple sugar-binding transport ATP-binding {ECO:0000313|EMBL:AAL63402.1}; TaxID=178306 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630; / NBRC 100827).;"
SCNpilot_cont_500_bf_scaffold_77_92

Not on your lists

comp(132301..133152)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B5DBF7
Uncharacterized protein {ECO:0000313|EMBL:KKN26559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_77_93
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133179..134090)
DNA (912bp) protein (304aa)
ABC transporter permease n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B6CCCF
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66562.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
ABC transporter permease protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_77_94
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134222..135766)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B65E84 rbh
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66563.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
putative solute-binding component of ABC transporter; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_77_95
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(135917..136858)
DNA (942bp) protein (314aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
Ribokinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1H1_ANATU
Tax=RBG_13_Chloroflexi_60_13_curated
SCNpilot_cont_500_bf_scaffold_77_96
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(136871..137860)
DNA (990bp) protein (330aa)
LacI family transcriptional regulator n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1H0_ANATU rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Tax=RBG_13_Chloroflexi_60_13_curated
SCNpilot_cont_500_bf_scaffold_77_97
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

138411..139022
DNA (612bp) protein (204aa)
putative sensor histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSI9_9BACT
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF57189.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_500_bf_scaffold_77_98
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

139068..139721
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF57190.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_cont_500_bf_scaffold_77_99
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

140046..143603
DNA (3558bp) protein (1186aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A96AC
Uncharacterized protein {ECO:0000313|EMBL:KIJ83508.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
response regulator receiver sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_77_100
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

143596..144258
DNA (663bp) protein (221aa)
Putative NarL family two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0U6_CALAS
putative NarL family two-component response regulator
Putative NarL family two-component response regulator {ECO:0000313|EMBL:BAL98883.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_500_bf_scaffold_77_101
unknown

Not on your lists

144576..145010
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_77_102
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145091..146347
DNA (1257bp) protein (419aa)
ABC sugar transporter, periplasmic ligand binding protein n=3 Tax=Vibrio nigripulchritudo RepID=U4EM78_9VIBR
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:CDX35849.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_77_103
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

146501..148012
DNA (1512bp) protein (504aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
Ribose transport ATP-binding protein rbsA n=1 Tax=Bacillus methanolicus PB1 RepID=I3DV45_BACMT rbh
Ribose transport ATP-binding protein rbsA {ECO:0000313|EMBL:EIJ78116.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
SCNpilot_cont_500_bf_scaffold_77_104
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

147993..149057
DNA (1065bp) protein (355aa)
ABC ribose transporter, permease component n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H1G2_DEIGI rbh
ABC ribose transporter, permease component; K10440 ribose transport system permease protein rbh
ABC ribose transporter, permease component {ECO:0000313|EMBL:AFD27359.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
SCNpilot_cont_500_bf_scaffold_77_105
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149148..151268
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6E86E rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI82044.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
beta-galactosidase rbh
SCNpilot_cont_500_bf_scaffold_77_106
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

151291..152106
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WPH2_PROPF
Uncharacterized protein {ECO:0000313|EMBL:EYR65293.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_77_107
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152874..155315)
DNA (2442bp) protein (814aa)
Multi-sensor hybrid histidine kinase id=4830459 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
putative sensor histidine kinase with a response regulator receiver domain rbh
Tax=RBG_13_Deltaproteobacteria_60_28_curated
SCNpilot_cont_500_bf_scaffold_77_108
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(155725..156417)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF57190.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_77_109
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(156417..158120)
DNA (1704bp) protein (568aa)
Multi-sensor signal transduction histidine kinase id=4074781 bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
putative signal transduction histidine kinase
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_cont_500_bf_scaffold_77_110
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

158764..160488
DNA (1725bp) protein (575aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WN41_9CYAN
diguanylate cyclase
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AFZ21835.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_cont_500_bf_scaffold_77_111
Macrococcus caseolyticus, Macrococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(161109..161411)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=B9E928_MACCJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH16739.1}; TaxID=458233 species="Bacteria; Firmicutes; Bacilli; Bacillales; Macrococcus.;" source="Macrococcus caseolyticus (strain JCSC5402).;"
SCNpilot_cont_500_bf_scaffold_77_112
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(161609..162319)
DNA (711bp) protein (237aa)
Putative membrane protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RQF5_SYNP3
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
SCNpilot_cont_500_bf_scaffold_77_113
unknown

Not on your lists

comp(162699..162983)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_77_114
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(163044..163604)
DNA (561bp) protein (187aa)
YceI family protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1B1_ROSS1
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ABQ92664.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_500_bf_scaffold_77_115
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163747..164610)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT04_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05575.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_77_116
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(164690..166036)
DNA (1347bp) protein (449aa)
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase {ECO:0000313|EMBL:ACZ40746.1}; EC=3.4.21.108 {ECO:0000313|EMBL:ACZ40746.1};; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
HtrA2 peptidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA3_SPHTD
SCNpilot_cont_500_bf_scaffold_77_117
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(166081..166650)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMX2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86035.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_77_118
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(166726..169338)
DNA (2613bp) protein (871aa)
ATPase AAA-2 domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHT8_ROSCS rbh
ATPase; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_77_119
unknown

Not on your lists

comp(169426..169689)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 91-120 of 139 in total

View Taxonomy