ggKbase home page

SCNpilot_cont_500_bf_scaffold_275

Search features with annotation key words

Displaying items 31-60 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_275_31
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(36488..38104)
DNA (1617bp) protein (539aa)
Integral membrane protein MviN n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C336_SPHTD rbh
integral membrane protein MviN; K03980 virulence factor rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_275_32

Not on your lists

comp(38135..38932)
DNA (798bp) protein (266aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Marine sediment metagenome DNA, contig: S01H1_L04327 {ECO:0000313|EMBL:GAF83794.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Myo-inositol-1(Or 4)-monophosphatase id=3637663 bin=GWC2_Deltaproteobacteria_42_51 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
SCNpilot_cont_500_bf_scaffold_275_33
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(39123..40694)
DNA (1572bp) protein (524aa)
UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000255|HAMAP-Rule:MF_00208}; EC=6.3.2.- {ECO:0000255|HAMAP-Rule:MF_00208};; UDP-MurNAc-tripeptide synthetase {ECO:0000255|HAMAP-Rule:MF_00208}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=MURE_ROSS1 rbh
SCNpilot_cont_500_bf_scaffold_275_34
unknown

Not on your lists

comp(40872..41795)
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_275_35
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41958..42476)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TWZ1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK86983.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_275_36
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

42717..43403
DNA (687bp) protein (229aa)
Putative protease/transporter id=2882045 bin=GWA1_Deltaproteobacteria_52_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein; K07403 membrane-bound serine protease (ClpP class)
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
SCNpilot_cont_500_bf_scaffold_275_37
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

43493..44647
DNA (1155bp) protein (385aa)
hypothetical protein id=24547941 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
SCNpilot_cont_500_bf_scaffold_275_38
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

44740..46059
DNA (1320bp) protein (440aa)
Major facilitator superfamily MFS_1 id=4757018 bin=GWC2_Chloroflexi_73_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
major facilitator superfamily MFS_1
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_cont_500_bf_scaffold_275_39
unknown

Not on your lists

comp(46136..46393)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_275_40
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(46436..46936)
DNA (501bp) protein (167aa)
Putative stress protein (General stress protein 26) n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KUI0_9SYNC
General stress protein {ECO:0000313|EMBL:KJH71553.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
putative general stress protein 26
SCNpilot_cont_500_bf_scaffold_275_41
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

47152..48138
DNA (987bp) protein (329aa)
Peptidase S58 DmpA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G670_CHLAD rbh
peptidase S58 DmpA rbh
Peptidase S58 DmpA {ECO:0000313|EMBL:ACL25803.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_500_bf_scaffold_275_42
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(48156..48863)
DNA (708bp) protein (236aa)
Rhomboid family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHN5_9CHLR
Rhomboid family protein {ECO:0000313|EMBL:CCF84197.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
rhomboid family protein
SCNpilot_cont_500_bf_scaffold_275_43
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

49135..50859
DNA (1725bp) protein (575aa)
Membrane protein-like protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5URL3_ROSS1
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABQ89266.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_500_bf_scaffold_275_44
unknown

Not on your lists

50996..51262
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_275_45
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51263..52165
DNA (903bp) protein (301aa)
Esterase/lipase n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DQ52_9GAMM rbh
Esterase {ECO:0000313|EMBL:AHK16254.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-15.;"
esterase/lipase rbh
SCNpilot_cont_500_bf_scaffold_275_46
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(52166..53206)
DNA (1041bp) protein (347aa)
adh; alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1] rbh
Alcohol dehydrogenase id=2262018 bin=GWB2_Chloroflexi_54_36 species=unknown genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81 rbh
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_500_bf_scaffold_275_47
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53221..53994)
DNA (774bp) protein (258aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU28_9EURY
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_cont_500_bf_scaffold_275_48
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(54084..55553)
DNA (1470bp) protein (490aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_500_bf_scaffold_275_49
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(55685..56200)
DNA (516bp) protein (172aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SFC0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM44368.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
SCNpilot_cont_500_bf_scaffold_275_50
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

56473..57855
DNA (1383bp) protein (461aa)
Extracellular ligand-binding receptor n=2 Tax=Chloroflexus RepID=A9WAM7_CHLAA
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABY36817.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_500_bf_scaffold_275_51
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

58139..58573
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHD3_9CHRO
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AFZ31928.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_cont_500_bf_scaffold_275_52
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

58662..59408
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured prokaryote RepID=H5SKC2_9ZZZZ
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Chloroflexi_66_10_curated
SCNpilot_cont_500_bf_scaffold_275_53
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(59412..60305)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B5EE82
Phosphotransferase {ECO:0000313|EMBL:KHE69087.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
aminoglycoside phosphotransferase
SCNpilot_cont_500_bf_scaffold_275_54
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60519..61520
DNA (1002bp) protein (334aa)
short chain dehydrogenase (EC:1.1.1.100) rbh
Short-chain dehydrogenase/reductase SDR n=2 Tax=Nitrosococcus oceani RepID=Q3JDV1_NITOC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KFI20571.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
SCNpilot_cont_500_bf_scaffold_275_55
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

61612..62100
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEI0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83092.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_275_56
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

62115..64013
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000362900F
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ACZ42939.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_275_57
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

64056..65435
DNA (1380bp) protein (460aa)
putative mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU6_9CHLR rbh
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_500_bf_scaffold_275_58
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(65418..67145)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M8Z5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42216.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
TPR domain-containing protein
SCNpilot_cont_500_bf_scaffold_275_59
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(67158..71672)
DNA (4515bp) protein (1505aa)
NHL repeat containing protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8E6_HERA2
NHL repeat-containing protein
Tax=RBG_13_Chloroflexi_54_9_curated
SCNpilot_cont_500_bf_scaffold_275_60
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(71735..74680)
DNA (2946bp) protein (982aa)
Glycosyl transferase family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4X6_SPHTD
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:ACZ39293.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Displaying items 31-60 of 70 in total

View Taxonomy