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SCNpilot_cont_500_bf_scaffold_46_70

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 86707..90384

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 999.99
  • Bit_score: 1010
  • Evalue 5.90e-292
  • rbh
Transcription-repair-coupling factor n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDJ9_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0
  • rbh

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Taxonomy

Oscillochloris trichoides → Oscillochloris → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3678
GTGGATTTAAACCTGGCGGGGCTTTTACCATTACTACGGGAAAGAGCCGAATTTCGCTCGGTCTGTGACCAGTTAAATCAGGCTGCCAGGGGTCACCGGCAGGACGCCCGGCTCAATATGTCGGGGTTAGCCGCCCCTGTCCGGCCTTATTTCCTGGCAACCCTGCAAAGCTTTCTGGGACGCCCGCTCCTGGTCCTGACCGCCCGCCCGGTCCAGGCCCGCGAACTGGCTCGCAACACCGCCGCCTATTCTTCCCAGCCTGACCTCGTCTTAAGCTGGCCGACCCCGGATACCCTGCCTTACGAGCGCATCGAACAAGACCCGGCTATCACCGGGGGCCGCCTCGAAACCCTGGCCGCCCTGGGCAACCTCGACCCGGTTCAATCGGCCCAACTGGTTATCTTTGCCTCGGCTAAAGGTCTGATGCAGCCCACCCTTTCCAAGGCCGACTTCCGCCGCCACATCGTGACCCTCAAGCGCGGCCAATTCCTCGACCTTAACGAACTACTGGGGTCGTTTATCCAGCTTGGTTACAGCCCCGAATCGCTGGTGGAGCAGCCCGGCCAGTTCAGCCGCCGGGGTGGGATTGTCGATTTCTTCCCCCTGACCTCTGAAATGCCAATCCGCCTGGAACTCTTTGGCGACGAAATTGACAGCCTCCGCTATTTCGACCCGGTTACCCAGCGCAGCAGCCAGCGCACCGAGCAAATTACCCTGACTCCGCCGGTCGAAGTGCCGCTATGGCGCTCCGGGGAAGCCTATGAACGTCTGGCCGAGGTCGACCGCTCCGGTCTGCGCGAGGAAGTCCGCGAGGAATGGGACAGGCTGCTCAGCCGGGTTGAAAACGGCGAACAGTTCGAGGGTATCGAGCAGTTCATGCCCTACTATACCGGCGGCGAGGACATGTGCAGCCTGCTCGACCATCTCCCAGCCGAAACCATTGTGATACTGGACGGCCCGGCCCAGATAAACTTTGCCGTCGAAGAGTTGACTCTCCAGGCGGAAGATTTGCGGGCCGAGTTTGAAAAGAACGGCGAAATCCCGGAGGGAGTCATCCGGCCCTATCTCAACTGGAAGGAACTTGAGGCCGGGTTCAGCCATTACCCGCGCCTGTTGCTCAACCGGACCGACGAGCAGGAGGACAAACTGGGGGAAGCGCCCGTGGTGACGGCGGCCCAGGTCCTGTCTGACGAGAATTTAGAGGTTGACCTCTTTGGACCGGTCAGCGAATTCGCCGGGCAAATTCCCCGCGTCATCCAGACCGTCGACACCTTCCTGAAAGAGGGGCAGCGCATCGTGGTCGTAACCCAACAGGCCGAGCGGTTGCGCGAACAGTTCGAGGACCACGATATTTTCCCGGTGTTGCGCAAAGAGGGGGGCGGCGGCAAACTTTCGACCCTGCCCGGTGCCGGTTCGTTTAACCTCTTGCACGGATCACTGGTCGGCGGCTGGCGCTCCGAGACACTCGGCCTGACCCTCCTGACCGACCGCGAGATTTTCGGCTGGACCAAGCAGGCCCAGCGGGGTGTCGAGAAAAGTGAGGGCCCCCGCCGCACCATGCAGCAGCGCGAGGCTTTCTTGCGCGACCTCAAACCGGGCGACTACGTGGTCCATATCGAACACGGTATCGCCCGTTACGAAGGGTTGGTCCGGCTTAAGGCCGAGACGACCGCCGCCGGGGAGGAAATCGAGCGCGAATATCTTTTCCTGAAATACGCCGAGCAGGATAAACTCTACGTGCCGATTGAGCAGGTAGACCGGGTCTTACCCTATAGCGCCCCCGGCCACACCACGCCCCAGCTAAACCGCCTGGGTAATTCCGACTGGACGCGGGCCAAACGGAAAGTCCGGGCCGCTGTCGAGGACATGTCCAAAGAACTGCTGGCCCTTTACAGCCAGCGCGCCGCCCGGCGGGGTTACGCTTTCGCCGCCGATAACACCTGGCAGCGCGAGATGGAAGAAGCCTTCCCCTACACCGAAACGCCCGACCAGATGCGGGCCATCCTCGATTCAAAGGGTGATATGGAGCAGCCTCGCCCAATGGACCGCCTTATCTGCGGCGACGTGGGTTATGGCAAGACCGAGGTGGCTCTGCGGGCTGCTTTCAAGGCCGTGATGGACGGCAAACAGGTGGCGGTGCTGGTGCCGACCACTATCCTGGCCGCTCAGCACTACGCCACCTTTGTCCAGCGTTTGAGCGCTTTCCCGACCGTTATCGAGCAGTTGTCGCGCTTCAGGACCAAAAAGGAGCAAGAGGGTATCCTTGCTCGTCTCGCCAAGGGTCAGGTTGACATAATCATAGGGACGCACCGCCTCCTGCAAAAGGATGTCTTTTTCAAGGACCTGGGCCTTTTAATCGTGGACGAGGAACAGCGCTTCGGGGTCAAGCACAAGGAGCGCCTCAAGCAGATGAAGCAAGAAGTGGACGTGCTGACCCTTTCGGCCACGCCCATCCCGCGCACCCTTCACATGTCGTTGACAGGTGTACGTGATATATCCATCATCGAGACCCCGCCCGCCGAACGTCTCCCGGTCAAGACCTACGTGACTGCCTACAGCGACACGCTCATCCGGGAGGCCATCGTCCGCGAACTCGAACGGGGTGGACAGGTCTTTTTCGTCCATAACCGGGTCCAGAGCATCGCCGAGATTGCCCACAAGCTAAAAGAGTTGGTCCCCCAGGCTCGGATTGTGGTCGCGCACGGCCAGATGGACGAGAACGAACTGGAAAAGGTGATGCTGGCTTTTACCGGGTACGAAGCGGATGTGCTGGTCTGTACCACCATCATCGAAAGCGGCCTCGACATTCCGAACGCCAATACCCTGGTGGTGGATAACGCCGTGATGTACGGTCTATCCCAGTTGTACCAGTTGCGAGGCCGGGTCGGGCGCGGGGCTAACCGGGCCTACGCCTACCTGCTCTACAAACCGGGCAGCACGATGACCGAGGACGCCCAGAAACGTCTCGACACGATGCTTGATACCCAGGAGCTTGGGGCCGGGTTCAAGATTGCCATGAAAGACCTCGAAATCCGGGGCGCGGGCAACCTTTTAGGAGCGGAGCAGAGCGGCCATATCGCTTCGGTCGGTTTCGAACTCTACATGCGGCTACTTGAAGAGGCGGTCGAACAGCTTAAAGGCGACGAGGAACGACCTATCGAAGCCCTGGTCGAAGCCCCGACGGTCAACCTCTCCCTGCCGCTCAAGGCTTACCTGCCGGAAGAATATATCCGCGACCAGGCGGTCCGGCTCGACCAGTACCGCAAACTGGCCGCCCCTTTGCAGACTGCCGGACAAATCCGCGAACTGGTCCGCGAGTTGGAAGACCGCTTTGGCAAGCTGCCGGAAGCGGCAAGCAACCTGATGTACCTGCTGGATGTAAAGGTGCTGGCAATCCGGGCCGGGGTCGAGAGTATTATCGAGCAGGACGGCGAGATTTACCTGCGCTGGGCCGCCCCGACCCTCGAAACCGAGATGCGCCGCAAAGCCGGGGCCAAGGCCGCGCCGCCCGAACGCAAACGCCCTACGGGCCGGGCAAACGTGGACCCGCGCCGCCTGATGAAGGAGTTCGGCGAAGCCCTGCGGATTACCCCGAACCAGATGCGCCTCAACATGAGATTGCTTAAAGATACCTGGCAGGACCGCCTCAAACAATTGCTGGAAGAACTCTCAACTTAA
PROTEIN sequence
Length: 1226
VDLNLAGLLPLLRERAEFRSVCDQLNQAARGHRQDARLNMSGLAAPVRPYFLATLQSFLGRPLLVLTARPVQARELARNTAAYSSQPDLVLSWPTPDTLPYERIEQDPAITGGRLETLAALGNLDPVQSAQLVIFASAKGLMQPTLSKADFRRHIVTLKRGQFLDLNELLGSFIQLGYSPESLVEQPGQFSRRGGIVDFFPLTSEMPIRLELFGDEIDSLRYFDPVTQRSSQRTEQITLTPPVEVPLWRSGEAYERLAEVDRSGLREEVREEWDRLLSRVENGEQFEGIEQFMPYYTGGEDMCSLLDHLPAETIVILDGPAQINFAVEELTLQAEDLRAEFEKNGEIPEGVIRPYLNWKELEAGFSHYPRLLLNRTDEQEDKLGEAPVVTAAQVLSDENLEVDLFGPVSEFAGQIPRVIQTVDTFLKEGQRIVVVTQQAERLREQFEDHDIFPVLRKEGGGGKLSTLPGAGSFNLLHGSLVGGWRSETLGLTLLTDREIFGWTKQAQRGVEKSEGPRRTMQQREAFLRDLKPGDYVVHIEHGIARYEGLVRLKAETTAAGEEIEREYLFLKYAEQDKLYVPIEQVDRVLPYSAPGHTTPQLNRLGNSDWTRAKRKVRAAVEDMSKELLALYSQRAARRGYAFAADNTWQREMEEAFPYTETPDQMRAILDSKGDMEQPRPMDRLICGDVGYGKTEVALRAAFKAVMDGKQVAVLVPTTILAAQHYATFVQRLSAFPTVIEQLSRFRTKKEQEGILARLAKGQVDIIIGTHRLLQKDVFFKDLGLLIVDEEQRFGVKHKERLKQMKQEVDVLTLSATPIPRTLHMSLTGVRDISIIETPPAERLPVKTYVTAYSDTLIREAIVRELERGGQVFFVHNRVQSIAEIAHKLKELVPQARIVVAHGQMDENELEKVMLAFTGYEADVLVCTTIIESGLDIPNANTLVVDNAVMYGLSQLYQLRGRVGRGANRAYAYLLYKPGSTMTEDAQKRLDTMLDTQELGAGFKIAMKDLEIRGAGNLLGAEQSGHIASVGFELYMRLLEEAVEQLKGDEERPIEALVEAPTVNLSLPLKAYLPEEYIRDQAVRLDQYRKLAAPLQTAGQIRELVRELEDRFGKLPEAASNLMYLLDVKVLAIRAGVESIIEQDGEIYLRWAAPTLETEMRRKAGAKAAPPERKRPTGRANVDPRRLMKEFGEALRITPNQMRLNMRLLKDTWQDRLKQLLEELST*