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SCNpilot_cont_500_bf_scaffold_77_79

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 113803..114387

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBE7_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 120
  • Evalue 2.10e-24
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 175.0
  • Bit_score: 121
  • Evalue 1.30e-24
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 120
  • Evalue 6.70e-25

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
TTGGAAAAAAACAGTACCACCCTTGTGTTAAATGACCACCCTGACGAATCCGACCTGGCCTTACTGCGCGAGATGGCAGTAGGCCGGGTCGAGGCGCTAAATCTACTTTACGCCCGCTACGGCAGTTTGCTCCTGGTCTACCTGACGGCCAGGCTGCACGACCGCCAGTGGGCCGAGGAAGTATTGCAGGATGTTATGCTGACCGCCTGGAACGGCGCGGGTAACTTCCAGGGTCGAAGTAGTGTCAAGACCTGGCTATTTACAATCGCCCGGAACCAGGCCGTGAATGCCTACACCCGCCGCAAGCCCGGACCTGACCCACTCGACCCGGAAATGCCCGGCCTGGCCGGAGTCTCGCCGGAGAAACTCCTGGAAAGGAGCCTGGACGGCGCAACTTTGCAGGAAGCCCTCTTGCAATTGCCGGAGGAGCAGCGCGAAACGCTCGAACTGCTCTTTTTCCAGGAGCTTTCCCAGGCGGAGGTGGCTCAGGTCATGCGGGTAGCGCCCGGCACCATCAAGAGCCGTTTATCAAGAGCCAGGACCAATTTACGCAAGTTTTTTAAGGTAAGGGAGGATTTTGAGTGA
PROTEIN sequence
Length: 195
LEKNSTTLVLNDHPDESDLALLREMAVGRVEALNLLYARYGSLLLVYLTARLHDRQWAEEVLQDVMLTAWNGAGNFQGRSSVKTWLFTIARNQAVNAYTRRKPGPDPLDPEMPGLAGVSPEKLLERSLDGATLQEALLQLPEEQRETLELLFFQELSQAEVAQVMRVAPGTIKSRLSRARTNLRKFFKVREDFE*