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SCNpilot_cont_500_bf_scaffold_262_23

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 29729..30886

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWU4_SYNWW similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 353.0
  • Bit_score: 359
  • Evalue 5.40e-96
sigma 38 (RpoS); K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 353.0
  • Bit_score: 359
  • Evalue 1.70e-96
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 353.0
  • Bit_score: 359
  • Evalue 7.60e-96

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Taxonomy

Syntrophomonas wolfei → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1158
ATGGCTACCAAGACTTATTTAAAAGAGAATAATGACAGCGTGGACCTGGCTGCTTTGATGGAACAGCCTGAACTGACGCTTTCGGCCACTAAATACAAGAAAAACAAGAATAATACTAAAGTTCAGGCTCATTGGGACGATAGCGCTACTACCCAGGCCGCAAAAGATGGTCTTGAAGAAGATGAAGTTCAGGAGCCGGCCAATTTCCTTGAAGCGGATGCTTTTACCCTTGGCGCGGAAGCCGAACTCTTAGAGATTGAGGCCGAAGAGGCCCAACTCGACCCCGAAGAAGCTCGCTTGAACGAACTGGCTTTCGAGTCGGCTGAGATTGATGACTCTTTGAAACTCTACCTGCGCGAGATTGGCCGTTTCCCCTTGCTTAATAGCGAGCAGGAAGTCAGCCTGGCCCGCAGGAAAGACGCCGGGGATCACGAAGCCGCTCAGAAGCTGGCGAACTCGAACCTGCGCCTGGTGGTTAGCGTTGCCAAGAAATATATGGGCCGGGGTATGACCCTCCAGGACTTAATCCAGGAAGGCAATATCGGCCTGATGCGGGCCGTCGACAAATTCGACCACACCAAAGGCTACAAGTTTTCGACCTACGCGACCTGGTGGATTCGCCAGGCCGTGACGCGCTCTATCGCCGACCAGGCCCGCGTGGTCCGCTTACCCGTCCACTTCGTGGAAGCGATTGGCCGGATGGAGCGGGTACGCCGCAGCTTGCAGCAGGTGTTGCATCGTGACCCGAAACCGGCTGAAATCGCCAAGGAACTGGGCGTGACGGTAGACAAGGTGCTGGATATGCTCAAGCACAAGACCGACACCATCTCCCTCGAAACCCCGGTTGGTGAGGAAGGGGACAATACCCTGGGCGACCTGGTCGAGGACCAGACTACCGAATCGCCGGTCGAAGTAGCGACCCGGTCGCTCCTGGCCGACCAGTTGCGGCAGGTGCTGGGTGGCCTGGGCGAACGAGAGCGCCGCGTCATCGAAATGCGTTTCGGCCTCGAAGGTGGCGAACCGCGTACCCTGGAGGAAGTTGGCCGCGAGTTCGGGGTTACCCGCGAACGCGCCCGCCAGATGGAAGCGATTGCGCTGCGCAAGTTGCGCGAACCGGAAAACGCCCGGTTGCTCCGCGACTACGCCGCCAGCCTCTAA
PROTEIN sequence
Length: 386
MATKTYLKENNDSVDLAALMEQPELTLSATKYKKNKNNTKVQAHWDDSATTQAAKDGLEEDEVQEPANFLEADAFTLGAEAELLEIEAEEAQLDPEEARLNELAFESAEIDDSLKLYLREIGRFPLLNSEQEVSLARRKDAGDHEAAQKLANSNLRLVVSVAKKYMGRGMTLQDLIQEGNIGLMRAVDKFDHTKGYKFSTYATWWIRQAVTRSIADQARVVRLPVHFVEAIGRMERVRRSLQQVLHRDPKPAEIAKELGVTVDKVLDMLKHKTDTISLETPVGEEGDNTLGDLVEDQTTESPVEVATRSLLADQLRQVLGGLGERERRVIEMRFGLEGGEPRTLEEVGREFGVTRERARQMEAIALRKLREPENARLLRDYAASL*