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SCNpilot_cont_500_bf_scaffold_1390_8

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 8421..9161

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, small permease component (Fragment) n=1 Tax=Herbaspirillum sp. YR522 RepID=J2V296_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 244.0
  • Bit_score: 99
  • Evalue 5.00e-18
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EJM99731.1}; Flags: Fragment;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.1
  • Coverage: 244.0
  • Bit_score: 99
  • Evalue 7.00e-18
Predicted gluconate TRAP family transporter,DctM subunit similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 238.0
  • Bit_score: 90
  • Evalue 7.20e-16

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTTTGATCGTGTTCCGGCAACGGGCGTCGAAGCGTCCGATGACGCCGATGCGCCGAATGAGAAGCATGCGGCGCCCGCGACCATCCTAGCCGGGTTGAGCAACGTCGCCGACGGCGCCGCGACCATCGCCGTCGTATTGCTGATGACGGTCTTGGTCGCGGTGATGTTCGCCGCGGTCATCTATCGCTATGTCCTGAACGATGCCCTGGCATGGTCGGAGGAGGTCGCCGGCTTCGCCATGGGGTGGCTCGTCTTCCTCGGCGCCGCCGTGCTCTTCCGCCGCGACGGCCACCCATCGAGCCGCCTGCTGCAGGACAAGGCCTCGCCCGCCATTCGCAAGGTCATCGAGCAAACGGTCGAAATCCTGGTCGGGATCTATCTCGTCGTCCTCATCGCCGCCGGCGTCGGCATTCTCTCCACCTTCCAGCCGCATTCGCCGGCGCTGTCGCTGCCTTATGGCGTGGCTTACGTCTCGATCCCGATATCGGGGGTCATCATGATCGTGCACTGGCTGGCCCGCCTGCGCGAACGTGTGTCGCCGCCGTCGATGGCGATCGTGGTGCTCATGGTGGCGGCGTTGGGAGGCGGCATCGTTTTCGCGACAGGCGCCAACGTCGAGGCGCTGCAGGCGGTACCGCTTTGGCTGTTGTGGCTGAGCCTGCCCGTAGCATTCTTCCTGGGCGTTCCGATCGCGCTCGTGCTCGGACTTGGCGCCACCTTGTTTATCACCGTGTCGTGA
PROTEIN sequence
Length: 247
MFDRVPATGVEASDDADAPNEKHAAPATILAGLSNVADGAATIAVVLLMTVLVAVMFAAVIYRYVLNDALAWSEEVAGFAMGWLVFLGAAVLFRRDGHPSSRLLQDKASPAIRKVIEQTVEILVGIYLVVLIAAGVGILSTFQPHSPALSLPYGVAYVSIPISGVIMIVHWLARLRERVSPPSMAIVVLMVAALGGGIVFATGANVEALQAVPLWLLWLSLPVAFFLGVPIALVLGLGATLFITVS*