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SCNpilot_cont_500_bf_scaffold_2593_24

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 25109..25642

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 181.0
  • Bit_score: 305
  • Evalue 3.50e-80
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 181.0
  • Bit_score: 298
  • Evalue 1.60e-78
diaminopimelate epimerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000374E1E0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 172.0
  • Bit_score: 309
  • Evalue 2.30e-81

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Taxonomy

Ochrobactrum sp. EGD-AQ16 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
TTGCCGCCGAGCAAGCCGCATTTCGGCTGGCAGGAGATTCCGCTTGCCGAAGAGTTCCGCGATACGCGCATGATCGAACTTCAGGTCGGGCCGATCGACGCGCCTGTCCTGCATTCGCCCTCCGTCGTGTCGATGGGCAATCCGCACGCGATCTTCTGGGTCGAAAACGATGTCTGGTCCTACGCGCTCGACCGCTTTGGGCCGCTTCTCGAAAACCATCCGATCTTCCCCGAACGCGCCAATATCTCGATCGTGCAGGTGACGGCGCCCGACGCGATGACCATCCGCACCTGGGAACGCGGCGCCGGCCTGACGCGCGCCTGCGGCTCGGCCGCCTGCGCCGCCGCCGTCTGCGGTGCACGCACCCGCCGCACGGAGCGTACGGTGACAGTGACCGTGCCCGGAGGCCCGCTCCTGATCGAATGGCGCGAGGACGATCATGTGATCATGACCGGCCCGGCGGAATGGGAGTTTTCCGGCACGCTCGATCCTGCCACCGGCCAATGGGTACGCCACGAGCGGGGCGCGGCCTGA
PROTEIN sequence
Length: 178
LPPSKPHFGWQEIPLAEEFRDTRMIELQVGPIDAPVLHSPSVVSMGNPHAIFWVENDVWSYALDRFGPLLENHPIFPERANISIVQVTAPDAMTIRTWERGAGLTRACGSAACAAAVCGARTRRTERTVTVTVPGGPLLIEWREDDHVIMTGPAEWEFSGTLDPATGQWVRHERGAA*