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SCNpilot_cont_500_bf_scaffold_5042_4

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(5040..5747)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUH2_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 233.0
  • Bit_score: 438
  • Evalue 5.60e-120
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 233.0
  • Bit_score: 438
  • Evalue 1.80e-120
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD08138.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 233.0
  • Bit_score: 438
  • Evalue 7.90e-120

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGACGTCAGGTGAGACAGACAATCAGATGCGCTTGCTGATTATCGAGGACGATCGCGAATCGGCCGACTATCTCGCGAAGGCGTTCCGCGAGGTCGGTCATGTCGCGGATCTCGCCGGCGACGGCGAGGAAGGTCTCTCCATGGCCGACGGCGGCGACTACGACGTGCTGGTGATCGATCGCATGTTGCCGAAGCGCGATGGGCTGTCCGTCATCGGCACCTTGCGCGACAAGGGCAATCGCACACCGGCCCTGATTCTCTCGGCGCTGGGGCAGGTCGACGACCGCATCAAGGGCCTGCGTGCCGGGGGCGACGACTATCTGCCTAAGCCGTATTCCTTCGCGGAATTGCTGGCGCGCGTCGAGGTCTTGTCGCGCCGCCATGGCGGACCGGCGGAGGAAACCGTTTATCGCGTCGGCGATCTCGAACTCGACCGGCTTTCGCATCGGGTCGCGCGCGGCAAGGAGGAGCTCACCCTGCAGCCGCGCGAATTCCGTCTGCTCGAATATCTCATGAAGCACGCCGGGCAGGTGGTGACGCGAACCATGCTGCTGGAAAACGTCTGGGATTATCATTTCGATCCGCAGACCAATGTGATCGACGTGCACATCTCGCGGCTGCGCGCGAAGATCGACAAGGGCTTCGACCGGCCTTTGCTGCATACCATCCGCGGCGCAGGTTATATGATCCGTGACGGCCTTCGGTAA
PROTEIN sequence
Length: 236
VTSGETDNQMRLLIIEDDRESADYLAKAFREVGHVADLAGDGEEGLSMADGGDYDVLVIDRMLPKRDGLSVIGTLRDKGNRTPALILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRHGGPAEETVYRVGDLELDRLSHRVARGKEELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRAKIDKGFDRPLLHTIRGAGYMIRDGLR*