ggKbase home page

SCNpilot_cont_500_bf_scaffold_9892_3

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(3011..4423)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 466.0
  • Bit_score: 797
  • Evalue 7.80e-228
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 470.0
  • Bit_score: 743
  • Evalue 3.00e-212
DNA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 469.0
  • Bit_score: 780
  • Evalue 7.10e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGTCGATCGTCCGGCGGACACGCAGCACGGCATGCTGAAATGGCTCGGCGATGCCGGCTTCGTCGTCAATCCGCTGATCGAGCTTTGCAAGAACGTCGAGGACGTGCTCGCATTCTATCGCCGCATCGGTGAGGAGCGCGCCTCGCTCGGCTATGACATCGACGGCGTGGTCTACAAGATCGATCGGCTCGACTGGCAGGAGCGGCTCGGCTTTGTCTCGCGCTCGCCGCGCTGGGCCATCGCGCACAAGTTCGCCGCCGAGCAGGCGACCACCGTGCTGGAGAAGATCGACATCCAGGTCGGCCGCACCGGCGCGCTGACGCCGGTGGCGCGGCTGACGCCGGTGACGGTCGGTGGTGTCGTCGTGCAGAACGCCACACTCCACAATGAGGATTACATCAAGGGGATCGGCAACGACGGCCAGCCGATCCGCGACGGCATCGATATTCGCGAAGGCGACACCGTTGTCGTACAGCGTGCCGGCGATGTGATTCCGCAGGTCGTCAGCGTCGTGCTCGACAAGCGGCCGAAGACGGCGAAGCCGTACGCATTCCCGCAGACATGCCCGGCCTGCGGTAGCCACGCCGTCCGCGAGAACGACGAGGTGGTGCGCCGCTGCACCGGCGCGCTGATCTGCCCGGCGCAGGCGGTGGAACGGTTGAAGCACTTCGTCTCGCGTCTCGCCTTCGACATCGAAGGGCTCGGCGAAAAGCAGATTCAGCAGTTCTATGAAGAAGGGCTAATCAAAACCCCGGTCGATATCTTCACCTTGCAGCGGCGCGATGCGCAAGCCGCGCAGAAGCTGGCCAATCGCGAGGGCTACGGCGAAGTCTCGGCGCGCAACCTGTTCGCTGCCATCGACGCGCGCCGCAAAATCGAACTGCACCGGCTGATCTTCGCGCTCGGCATTCGCCATGTCGGGGAAGGCAACGCCAAACTGCTGGCGCGGCACTACGGCACTATCGATGCGTTTCGCGAGGCAATGCTGGCGGCAGCCGCCGGACTAAGCAACGACGGAAATACGTCGGAAGCCTATCAGGACCTCAACAACATCGGCGGCATCGGCGATATCGTTGCGGATGCGGTCGTCGAATTCTTCGCCGAACCGCGCAACGTCACGGCGCTCGATACGCTACTGCATGAAATCGAGGTGTTGCCGGCCGAAAAGCCGCGGCAGACCTCAAAGGTATCCGGCAAGACGGTGGTGTTCACCGGCTCGTTGACGAAATTCACGCGCGATGAAGCCAAGGCCGTCGCGGAGCGGCTCGGCGCCAAGGTCGCGGGATCGGTGTCGAAGAAGACCGATTACGTGGTGGCGGGCGAGGACGCCGGCTCCAAACTCACCAAGGCGCGCGAATTGGGCGTTGCAGTGCTGACCGAGGACGAGTGGCTTGGGTTGATTGAGGGATAA
PROTEIN sequence
Length: 471
MVDRPADTQHGMLKWLGDAGFVVNPLIELCKNVEDVLAFYRRIGEERASLGYDIDGVVYKIDRLDWQERLGFVSRSPRWAIAHKFAAEQATTVLEKIDIQVGRTGALTPVARLTPVTVGGVVVQNATLHNEDYIKGIGNDGQPIRDGIDIREGDTVVVQRAGDVIPQVVSVVLDKRPKTAKPYAFPQTCPACGSHAVRENDEVVRRCTGALICPAQAVERLKHFVSRLAFDIEGLGEKQIQQFYEEGLIKTPVDIFTLQRRDAQAAQKLANREGYGEVSARNLFAAIDARRKIELHRLIFALGIRHVGEGNAKLLARHYGTIDAFREAMLAAAAGLSNDGNTSEAYQDLNNIGGIGDIVADAVVEFFAEPRNVTALDTLLHEIEVLPAEKPRQTSKVSGKTVVFTGSLTKFTRDEAKAVAERLGAKVAGSVSKKTDYVVAGEDAGSKLTKARELGVAVLTEDEWLGLIEG*