ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_500_bf_scaffold_12676_6

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(5024..6280)

Top 3 Functional Annotations

Value Algorithm Source
kdpD; putative two-component sensor histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 414.0
  • Bit_score: 548
  • Evalue 2.20e-153
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 414.0
  • Bit_score: 548
  • Evalue 9.60e-153
Putative two-component sensor histidine kinase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AGT5_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 414.0
  • Bit_score: 548
  • Evalue 6.80e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
GTGGCGCTGTTTTTCTTCCTGACGGTGGCACTGATCGCGTCGAACCTCACATCGAACGTCCGAACACAAGCGATGATGGCGCGCAATCGTGCCAGGACGACCGAGGACCTCTACCTGTTCAGCCGCAAGCTTGCCGGCATCGCCTCGCTCGACGACCTTCTGTGGGTGATCTCCTCGCAGGTCGCCTCGATGCTGAAGGTCAGGGTCGTGCTTTTTCTGCCCGAACAAGGGTCGCTCGAACTGAAGGCGGCATGGCCGCCGGAGGACGTCGCCGAGGAGGCCGATCTGGCGGCGGCGAAATGGTCATGGGAAAGCAATAAGCCAGCCGGTCGCGGCGCCGACACGCTGCCGGGAGCCAAGCGCCTGTTCCTGCCGATGCGGACGGGACGCAGCCCTGTGGCCGTCATCGGCATCGACAGCGACAAGCAAGGCCCGTTGCTGACCCCCGACGAGCAGCGTCTGCTCGATGCGCTGTCGGATCAAGCAGCGCTGGCCATCGAGCGCATCAACCTGTCGGACGACTTCGACAAGGCCAAGCGCGCGGCCGAGCGCGACCAGCTTCTCGCCGCGCTGCTCACCTCCATATCGCACGATCTGCGTACGCCGCTGGCCTCGATCCTCGGCGCGGCGGACAGCCTCGGCAGCCTGCCGGATCTGAAGCCGCGCGACAGGACGGAACTGCTTGCCACGATCCAGGAGGAGGCCGAGCGGCTCAACCGGTTCATCGCCAATCTGCTCGACATGACCAGACTGGAATCGGGCGCGGTCGAACCTAATTTGAGCCCGGTCGATGTCGGCGAAGTTGTTGGCGCCGCACTGCGTCGGGCGGAAAGGATCCTGGCCGGCCATCATGTCGAGACGGTTGTGGCGCCGGACCTTCCCTTGCTGCGGCTCGACCCGGTGCTGTTCGAGCAGGTGCTGTTCAATCTTATGGACAATGCGGCGAAATACGCCCCGGCCGGAACGACGATCCAGCTTCGTGGCTGGCGTGAAGGCGCGGCGGTGCATCTCCAGGTGCTGGACGAAGGGCAAGGTATTCCGAAGCCGGACCTGGAGCGCGTCTTCGACAAATTCTACCGCGTGCGCAAATCCGATAGCCAGCGCGCCGGCACCGGGTTGGGCCTCGCCATCTGCCGCGGCTTTGTTGAGGCGATGGGCGGGGTGATCGAAGCAGGCAACCGGACCGGCAGGCATGGCGCCGTCTTCACCATAAAATTGCCGGTCACGGCCGTCGGCCAGTTCGGTACGGCGGCATGA
PROTEIN sequence
Length: 419
VALFFFLTVALIASNLTSNVRTQAMMARNRARTTEDLYLFSRKLAGIASLDDLLWVISSQVASMLKVRVVLFLPEQGSLELKAAWPPEDVAEEADLAAAKWSWESNKPAGRGADTLPGAKRLFLPMRTGRSPVAVIGIDSDKQGPLLTPDEQRLLDALSDQAALAIERINLSDDFDKAKRAAERDQLLAALLTSISHDLRTPLASILGAADSLGSLPDLKPRDRTELLATIQEEAERLNRFIANLLDMTRLESGAVEPNLSPVDVGEVVGAALRRAERILAGHHVETVVAPDLPLLRLDPVLFEQVLFNLMDNAAKYAPAGTTIQLRGWREGAAVHLQVLDEGQGIPKPDLERVFDKFYRVRKSDSQRAGTGLGLAICRGFVEAMGGVIEAGNRTGRHGAVFTIKLPVTAVGQFGTAA*