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SCNpilot_cont_500_bf_scaffold_12900_6

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 4813..5580

Top 3 Functional Annotations

Value Algorithm Source
phosphatidylcholine synthase; K01004 phosphatidylcholine synthase [EC:2.7.8.24] similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 243.0
  • Bit_score: 346
  • Evalue 9.90e-93
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 243.0
  • Bit_score: 346
  • Evalue 4.40e-92
Phosphatidylcholine synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214L8_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 243.0
  • Bit_score: 346
  • Evalue 3.20e-92

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCAAACGACGGAAAATCCTGCTAAAAACCGCGATTACATGACGCCGGCGGACACCTCGCAACAGCCTTCGACTTCGACCCGCGCCGCGGCCTTCGGCGTTCACGTCTTCACGGCGCTGGGCGCCGGCCTCGCGCTGATCGCGCTATTGGAAGCGGTGCGCGAACACTGGGCTGCGATGTTCGGCTGGCTCGGCGCGGCTCTCATCGTCGATGCCGTTGACGGGCCGCTCGCCCGCCGCCTCAACGTCGCGGCGCTGCAACCGCGCTGGTCCGGCGACACGCTCGATCTCGTGGTCGATTTCCTCACCTACGTGTTCGTTCCGGCTTATGCCATTGCCGCCAGCCGGCTGCTGCCGCCGATCGCGGGGCCGTTGATCGGCATCGGCATCGTCGTCACCAGCGCGCTGTATTTCGCCGACCGGCGCATGAAGACCGACGACAATCATTTTCGCGGATTCCCGGCGCTGTGGAATGCGGCGGCGTTCTATCTGTTTCTGCTGCACCCGTCGCCATGGCTGGCGGCGCTGGCGATGACAGGCTTGATCGTGCTGACATTCGTGCCGATCCATGTGCTGCATCCGGTTCGCGTCGTGCGCTTCCGCCTGTTCAATCTCGCATTGATGGTGCTGTGGGCGGGGCTGACGGTCCTTGCCCTCGCGATGGATTTCAATGTTCCGGCCTCGGTTAGCGTCGCCTTGTGCGCGATCGGGCTCTATGTTGTCTTCGCCGATCCGCTTCTCCGCCTGTTTGGGGTTTCCAGGACATGA
PROTEIN sequence
Length: 256
MQTTENPAKNRDYMTPADTSQQPSTSTRAAAFGVHVFTALGAGLALIALLEAVREHWAAMFGWLGAALIVDAVDGPLARRLNVAALQPRWSGDTLDLVVDFLTYVFVPAYAIAASRLLPPIAGPLIGIGIVVTSALYFADRRMKTDDNHFRGFPALWNAAAFYLFLLHPSPWLAALAMTGLIVLTFVPIHVLHPVRVVRFRLFNLALMVLWAGLTVLALAMDFNVPASVSVALCAIGLYVVFADPLLRLFGVSRT*