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SCNpilot_cont_500_bf_scaffold_3866_1

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: comp(600..2063)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C61B3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 490.0
  • Bit_score: 932
  • Evalue 2.00e-268
  • rbh
RND transporter {ECO:0000313|EMBL:AJF00641.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 479.0
  • Bit_score: 860
  • Evalue 1.30e-246
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 486.0
  • Bit_score: 642
  • Evalue 9.80e-182
  • rbh

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGACGCTGCATTTCCGAACGATGGCCCTCGCGGCCGCCCTTCTCGTCACCGGCTGCACGGTTGGCCCCGATTATCGTGGCGCGCCCGAGGTAGCGGCCAACGCCCTGCGCACGGGCGCCACGTATGCGCATGCCGGAGCCGGCATCGCGGCGCATACGCCGGGGGTCGCCCGATGGTGGACGACGCTTGGCGATGCGCAACTCACGGCGCTGATCGACGACGCCATCGCCCATAGCCCGGATATCCGCGCGGCACAGGCGAAGGTGCGCCAGTCTCGCGCGAGCCTGCGCAATCATCAGGCCGACCTGCTGCCCAAGGCGGGCGTCGATCTCGCGACGCTGCGCACGCGCTCGCCCGATCTGAGCCTGCTTGGCGGCAATGGCGGCAGCGGCAGCGGTCGCGGCCCGCTCGACTTGTATGTCGCCGGGTTCGACGCGAGTTGGGAGATCGATCTATTCGGCGGTACGCGACGCGCTGTCGAGGCCGCCAGCGCGGACGCCGATGCGGCGTCGGAGGATCTCGCGGACGCCCACGTACAACTCGCCGCCGAAGTCGCACAGGCCTACGTCGCCTTGCGCGATCAGCAGGCACGGCTGGCGCTGGTGCGCGACTCGGCACAACTCGAAGGCGAGATGCTCGATCTCACCCGCCAGCGTCGCGCGGGGGGCGTCGCGTCGGAACTCGACGTCGAACGACTCATCACGCAGGTGGAACAGACGCAATCGCGCGTGCTGCCGCTCGAAGCGGACGTCATCGAATCGCTCGATCAGTTGGCGCTGCTCACCGGCCGTGCGCCGGGTGCGTTGGACACCGAGCTGTCGGTTCCCAGGGCCTTGCCGAGCGTGCCGAAGACGGTCGCCATCGGCGATCCGTCCGCGTTGTTGCAGGCACGCCCGGACATCCGTGCGGCAGAACGTCGCCTGGCGTCGCAGAACGCCCAGATCGGTGTGCAAACGGCCAACTGGTTTCCGAAGCTCTCGATCATGGGCGAACTCGGATATTCGGCGCTGGATCCGGGCCATCTGGTGCGTAAAGACAACTTCAGCTGGATGACGCTACCGCGCCTGCAATGGAATGTGCTCGATTTTGGACGCGTGCAGGCGAGCGTCGACGGCGCGAAGGCCGGTCGCGATCAGGCGCAGGCGAAGTATGAAAGTGCCGTGCTCAGCGCGTTGCGCGACGCCGACGTGGCACTGGCACGTTACGGGCATCAGCGCGAAAACGTATACCGTCTGCGCAGTGTGGAGGCCTCGGCCACGCGGGCCGCAACGCTCACGCGTCAACGTTATCGCGCCGGCACCGCAAGCACGCTCGATTGGCTCGATGCCGAACGCACGCGCTTTTCCGCCGAGCAGGACCGGGTCGCGGGCGATGCGCAACTGCTCAAGTCGTTCGTGACGCTACAGAAGGCGCTGGGTCTGGGATGGCAGGTGGGATCGACGCCGGGTTCGACGACGGGGTAA
PROTEIN sequence
Length: 488
MTLHFRTMALAAALLVTGCTVGPDYRGAPEVAANALRTGATYAHAGAGIAAHTPGVARWWTTLGDAQLTALIDDAIAHSPDIRAAQAKVRQSRASLRNHQADLLPKAGVDLATLRTRSPDLSLLGGNGGSGSGRGPLDLYVAGFDASWEIDLFGGTRRAVEAASADADAASEDLADAHVQLAAEVAQAYVALRDQQARLALVRDSAQLEGEMLDLTRQRRAGGVASELDVERLITQVEQTQSRVLPLEADVIESLDQLALLTGRAPGALDTELSVPRALPSVPKTVAIGDPSALLQARPDIRAAERRLASQNAQIGVQTANWFPKLSIMGELGYSALDPGHLVRKDNFSWMTLPRLQWNVLDFGRVQASVDGAKAGRDQAQAKYESAVLSALRDADVALARYGHQRENVYRLRSVEASATRAATLTRQRYRAGTASTLDWLDAERTRFSAEQDRVAGDAQLLKSFVTLQKALGLGWQVGSTPGSTTG*