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SCNpilot_cont_500_bf_scaffold_35926_2

Organism: SCNPILOT_CONT_500_BF_Pandoraea_64_5

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 4 ASCG 8 / 38 MC: 2
Location: 212..1198

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 328.0
  • Bit_score: 593
  • Evalue 1.60e-166
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BAF76 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 328.0
  • Bit_score: 639
  • Evalue 2.30e-180
  • rbh
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 327.0
  • Bit_score: 423
  • Evalue 8.20e-116
  • rbh

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Taxonomy

Pandoraea oxalativorans → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGACGGACCCGCGTTCGCAGGCACCCCGCCAAAAACTTCCCCGTTTCGCGCTCGATGGCGTGTTGCTCCTGGACAAGCCGCTGGGCCTGTCGTCCAACGACGCGCTGATCCGGGCCAAGCGATTGTTACAGGCGTTGAAGGCGGGGCATACCGGCACGCTCGATCCGTTGGCGACCGGTCTGTTGCCGCTTTGTTTCGGCGAGGCGACGAAGTTCTCGCAGGACTTGCTCGAAGCCGACAAGACCTATGAAGCGCTGGTGCGTCTGGGCGAGACGACGACCACCGGCGACGCCGAGGGCGAGGTGTTGCAAACGCGCCCTGTGACGGTGGACGAAGCGGCGATTCGCGCGGTGCTGCCACGCTTCACGGGCCCGATCTCGCAGGTGCCGCCGATGTATTCGGCACTCAAGCGAGACGGCAAGCCGTTGTACGAATATGCGCGCGCGGGGCAGACCCTCGAGCGCGAAGCGCGTGCGGTCACGATTCACGCGTTGGAGATGACAGCGTGCGCGTTGCCGGCCGTCGCCGAGTTCTCGTTTCGCGTGACTTGTAGCAAAGGCACCTACGTGCGGACGTTGGCCGAAGATATCGGTGAGGCGCTGGGCTGCGGCGCGCATTTGCGCGCGCTGCGCCGCACGGCCGTCGGTCCGCTCACGCTTGACGGCGCCGTGACGCTGGAAGATTTGGGGGCGCTCGATCACGCGCAACGTGTGCAGAGGCTGGCACCGGTCGATGCGTTGCTCGAGACGCTGCCGACGATCTGGCTCGACGAAACGCTCGCCAGGCGCTTCAGCCACGGACAACGTCTGCGTCTGGACGAGGCGCGCTGTCCTCAGGCGCTGCGCGCGTGCGCCGGGGCGTCCGAGGCGATCGAGGTGAAGGTGTATGCCGAAGCCGATGGCGACGCCGCCGTGCGGTTGCTCGGCGTTGCGCGACTCGATGGCGAGGCGCTGCTCACACCGCAACGGCTGTTGAAGACCCAGTAA
PROTEIN sequence
Length: 329
MTDPRSQAPRQKLPRFALDGVLLLDKPLGLSSNDALIRAKRLLQALKAGHTGTLDPLATGLLPLCFGEATKFSQDLLEADKTYEALVRLGETTTTGDAEGEVLQTRPVTVDEAAIRAVLPRFTGPISQVPPMYSALKRDGKPLYEYARAGQTLEREARAVTIHALEMTACALPAVAEFSFRVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGAVTLEDLGALDHAQRVQRLAPVDALLETLPTIWLDETLARRFSHGQRLRLDEARCPQALRACAGASEAIEVKVYAEADGDAAVRLLGVARLDGEALLTPQRLLKTQ*