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SCNpilot_cont_500_bf_scaffold_955_27

Organism: SCNPILOT_CONT_500_BF_Rhodospirillales_70_8

partial RP 30 / 55 MC: 1 BSCG 28 / 51 MC: 1 ASCG 8 / 38
Location: comp(23245..23787)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002EBC11B similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 171
  • Evalue 9.80e-40
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 175
  • Evalue 7.30e-41
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 169.0
  • Bit_score: 168
  • Evalue 2.60e-39

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGACCGCGACCGACCGCCAACGCCGCTTCGAGCTGATGGCGCTGCCGCATCTCGATGCGGCGTACAACCTCGCGCGCTGGCTGACGGGCAATCCGGCGGATGCGGAGGACGTGGTGCAGACCGCCTATCTTCGGGCCTTCCGCTACTTCGAGGCCTGGCGCGGCGGCGATCTGCGCGTCTGGCTGCTGGCGATCGTGCGCACGAGCTTCGTGGACTGGGCGCGGGAGAACCGGTCCGCCCGGCTGGTGTTCCGCGCCGAACCCACGGATGAGGCAGGAGAAGCCCTGCCGCCGCTCTGGACCGAACCGACGCGGGACCCCGAGGCACAGGTCCTGGGAACCCTCGACGGCCAGAGCCTGGCGACGCTGATCCAATCCCTGTCGCCCGAATACCGGGAGGTGCTGATCCTGCGCGAGATGGAGGACATGTCGTACAAGCAGATCGCCGCGGTGGCCGGCGTGCCGATCGGCACGGTGATGTCGCGCCTGGCCCGCGCCCGCGCGGAGCTGCGCCGCGCCTGGCTGGCGCAGGAGCCCGCATGA
PROTEIN sequence
Length: 181
VTATDRQRRFELMALPHLDAAYNLARWLTGNPADAEDVVQTAYLRAFRYFEAWRGGDLRVWLLAIVRTSFVDWARENRSARLVFRAEPTDEAGEALPPLWTEPTRDPEAQVLGTLDGQSLATLIQSLSPEYREVLILREMEDMSYKQIAAVAGVPIGTVMSRLARARAELRRAWLAQEPA*