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SCNpilot_cont_500_bf_scaffold_50608_2

Organism: SCNPILOT_CONT_500_BF_Legionella_38_4

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38
Location: 550..1293

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U6L9_CYAP2 similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 247.0
  • Bit_score: 220
  • Evalue 2.50e-54
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CEK10512.1}; TaxID=449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella hackeliae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 247.0
  • Bit_score: 228
  • Evalue 1.00e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 247.0
  • Bit_score: 220
  • Evalue 7.90e-55

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Taxonomy

Legionella hackeliae → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAAATTACACATAACAAATGGAGACAACGCAGCAGAGCTCATCGAGCAATCCTATCCAGAGGCTGAGGTAATTGCCTGGCGTGATGTCCTACATGAAGGTCCTGTCCCTTCTCTTCCTCTAAGGGAGTTAAATAAAGTTCGCGCACAATATCTTGCTGAAAAAGGGTATGGGGATTATCAAATCATTTTGAACGACGCTATCAGCAATCTACACAAACTAGAAGATTATCGCCATTATGATGAAATTATCCTATGGTTTGAACATGATTTATATGATCAGTTACAACTGATTCAAGTTCTGCATTGGTTTTCAACCAAATCTTTATCAAAAACGCATTTATCCTTCATTAATATTAATCAATTTGCTGGCGTATCTCCTTTTTACGGATTTGGACAACTATCTGTTGATCAAATGAGTTCACTTTTCCCTCATCGTCAGCCTATAACTTCGTTACATTTAGAACTAGGCAAAATGGCCTGGGAAGCATTTACCAATAAAAATCCACAAAGCCTAGTTTTATTGCTCGAAACAGATTTATCTTTATTGCCTTTCTTGAAAAACGCTATGATTAGACATTTGCAAGAATTCCCCTCCTCAAAGAATGGATTAAACAGAACAGAACAATTTATTCTTACCTCTCTAAAAAGAGAGAGTAAGCGTTTATCTGATATCTTTTGGCAGTTGCCGGTTGATGAAGGCACTTATTACATGGGTTTAGGCGACATAAGTTTTTGGTCGATC
PROTEIN sequence
Length: 248
MKLHITNGDNAAELIEQSYPEAEVIAWRDVLHEGPVPSLPLRELNKVRAQYLAEKGYGDYQIILNDAISNLHKLEDYRHYDEIILWFEHDLYDQLQLIQVLHWFSTKSLSKTHLSFININQFAGVSPFYGFGQLSVDQMSSLFPHRQPITSLHLELGKMAWEAFTNKNPQSLVLLLETDLSLLPFLKNAMIRHLQEFPSSKNGLNRTEQFILTSLKRESKRLSDIFWQLPVDEGTYYMGLGDISFWSI