ggKbase home page

SCNpilot_cont_500_bf_scaffold_53760_1

Organism: SCNPILOT_CONT_500_BF_Legionella_38_4

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38
Location: comp(239..1081)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C81EB similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 280.0
  • Bit_score: 532
  • Evalue 3.40e-148
  • rbh
ydaO; C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 279.0
  • Bit_score: 519
  • Evalue 9.40e-145
  • rbh
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 279.0
  • Bit_score: 519
  • Evalue 4.20e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Legionella longbeachae → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGTCCAATCCTTCTCAAGTTGAAAAAAAACTACTGCATTACACCGGTAAGGCCATCGCGGATTTTAATATGATCCAGCGTGGAGACCGTGTTATGGTCTGTTTATCAGGCGGTAAAGACTCTTTTACCCTCTTAACCATTCTGAATCAATTACGTCGACGCTCCGGCAATAAATTTGAACTTTTTTCATTTACCCTGGATCAAGCACAACCAGGATGGAATGATGCCGCACTACGTCAATGGCTTGCGGATCGCTCCATTCCCCATGAAATACTAACTCGTGATACCTATAGTATCGTTAAAGAAAAAATACCCGAGGGTAAAACATATTGTTCTTTATGCTCGCGTATACGACGCGGCATTATTTATCGGTATGCAGAGGAGCACGGTTTTAATAAAATCGCCCTTGGGCATCATCGTGACGATCTGGTTCGTACTCTGATGATGTCTATCTTATACAATGGTGATATCCGCTCAATGCCACCGAAGTTACTTAGCGATAATAAAAAGCATATAGTCATCCGACCATTATGTTATGTTCAAGAAAAAGATATTATTACCTTTGCTCAAGAACAATCTTATCCTATCATTCCATGCACTCTTTGTGGTTCTCAGGAAAATTTAATGCGCAAAAAAATAACGCATTTAATTAATCAACTTGCTGACGAAAACCCCAAAGTACCAAGTAATATCCTGCATGCGCTGCAAAGTATAAAACCCAGCCAACTGATGGATCAAAGTATGTGGAATTTTAAAAATCTTGAGCATGACTTAGTCACGAATCAGGCAACTGATAGGGACGAAGTGTTCCATGCCGAAGAATTTGACCCCATTGAAGCCTAA
PROTEIN sequence
Length: 281
MSNPSQVEKKLLHYTGKAIADFNMIQRGDRVMVCLSGGKDSFTLLTILNQLRRRSGNKFELFSFTLDQAQPGWNDAALRQWLADRSIPHEILTRDTYSIVKEKIPEGKTYCSLCSRIRRGIIYRYAEEHGFNKIALGHHRDDLVRTLMMSILYNGDIRSMPPKLLSDNKKHIVIRPLCYVQEKDIITFAQEQSYPIIPCTLCGSQENLMRKKITHLINQLADENPKVPSNILHALQSIKPSQLMDQSMWNFKNLEHDLVTNQATDRDEVFHAEEFDPIEA*