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SCNPILOT_CONT_500_BF_Legionella_38_4

In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Legionella  →  Legionellales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 3.96 Longest contig: 14.82 Kbp Bin length: 2.20 Mbp GC content: 38.42 %
Contigs count: 1020 Features count: 2836 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38

Description

from TS-ESOM, added from ggkbase

Displaying items 551-600 of 1020 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_53005
Species: Legionella fallonii (100%)
2 1247 bp 42.58 3.01 100.08
SCNpilot_cont_500_bf_scaffold_39593
Species: Legionella fallonii (50%)
2 1578 bp 33.46 4.12 92.97
SCNpilot_cont_500_bf_scaffold_65413
Species: Legionella drancourtii (50%)
2 1031 bp 36.95 3.15 86.71
SCNpilot_cont_500_bf_scaffold_48182
Species: Legionella oakridgensis (50%)
2 1345 bp 41.78 2.60 100.15
SCNpilot_cont_500_bf_scaffold_17547
Species: Legionella fallonii (50%)
2 2948 bp 38.50 3.56 90.77
SCNpilot_cont_500_bf_scaffold_39852
Species: Legionella hackeliae (50%)
2 1570 bp 34.84 4.30 90.57
SCNpilot_cont_500_bf_scaffold_48953
Species: Legionella drancourtii (50%)
2 1327 bp 38.88 3.96 75.28
SCNpilot_cont_500_bf_scaffold_54498
Species: Legionella longbeachae (50%)
2 1220 bp 36.23 3.48 85.08
SCNpilot_cont_500_bf_scaffold_38711
Species: Legionella hackeliae (50%)
2 1605 bp 37.45 4.36 91.96
SCNpilot_cont_500_bf_scaffold_44467
Species: Legionella fallonii (50%)
2 1438 bp 40.26 4.00 98.05
SCNpilot_cont_500_bf_scaffold_36785
Species: Legionella longbeachae (100%)
2 3264 bp 38.17 3.83 76.10
SCNpilot_cont_500_bf_scaffold_64477
Species: Legionella drancourtii (50%)
2 1046 bp 41.01 3.82 86.62
SCNpilot_cont_500_bf_scaffold_22482
Species: Legionella longbeachae (100%)
2 2452 bp 35.97 4.79 82.46
SCNpilot_cont_500_bf_scaffold_42114
Species: Legionella longbeachae (100%)
2 1501 bp 39.37 2.83 91.34
SCNpilot_cont_500_bf_scaffold_44726
Species: Legionella longbeachae (100%)
2 1431 bp 36.13 5.24 69.60
SCNpilot_cont_500_bf_scaffold_45943
Species: Legionella drancourtii (50%)
2 1400 bp 39.00 2.50 62.79
SCNpilot_cont_500_bf_scaffold_35942
Species: Legionella longbeachae (100%)
2 1704 bp 38.09 5.13 99.12
SCNpilot_cont_500_bf_scaffold_46754
Species: Legionella pneumophila (50%)
2 1380 bp 37.17 4.89 72.17
SCNpilot_cont_500_bf_scaffold_48963
Species: Legionella longbeachae (50%)
2 1327 bp 38.43 4.71 89.07
SCNpilot_cont_500_bf_scaffold_34336
Species: Legionella longbeachae (50%)
2 1770 bp 35.14 3.81 74.58
SCNpilot_cont_500_bf_scaffold_70696
Species: Legionella drancourtii (100%)
2 1713 bp 35.14 2.77 98.07
SCNpilot_cont_500_bf_scaffold_52718
Species: Legionella longbeachae (50%)
2 1252 bp 36.34 3.19 97.04
SCNpilot_cont_500_bf_scaffold_66471
Species: Legionella fallonii (50%)
2 1015 bp 39.21 3.69 85.12
SCNpilot_cont_500_bf_scaffold_48455
Species: Legionella longbeachae (100%)
2 1338 bp 39.39 2.99 95.07
SCNpilot_cont_500_bf_scaffold_43444
Species: Legionella longbeachae (100%)
2 1464 bp 33.06 3.76 59.43
SCNpilot_cont_500_bf_scaffold_30301
Species: Legionella parisiensis (50%)
2 1950 bp 42.72 4.87 84.92
SCNpilot_cont_500_bf_scaffold_60741
Species: Legionella fallonii (50%)
2 1109 bp 36.43 3.38 91.16
SCNpilot_cont_500_bf_scaffold_49345
Species: Legionella pneumophila (50%)
2 1319 bp 35.63 2.65 85.75
SCNpilot_cont_500_bf_scaffold_33094
Species: Legionella oakridgensis (50%)
2 3008 bp 39.99 3.57 33.94
SCNpilot_cont_500_bf_scaffold_52466
Species: Legionella longbeachae (50%)
2 1959 bp 35.38 3.32 67.38
SCNpilot_cont_500_bf_scaffold_52722
Species: Legionella longbeachae (100%)
2 1252 bp 38.66 2.80 91.53
SCNpilot_cont_500_bf_scaffold_48971
Species: Legionella drancourtii (100%)
2 1327 bp 44.39 3.58 100.15
SCNpilot_cont_500_bf_scaffold_59428
Species: Legionella drancourtii (100%)
2 1131 bp 35.90 3.54 100.27
SCNpilot_cont_500_bf_scaffold_30816
Species: Legionella massiliensis (50%)
2 1924 bp 42.05 4.16 87.79
SCNpilot_cont_500_bf_scaffold_38216
Species: Legionella longbeachae (50%)
2 1622 bp 37.73 4.01 84.34
SCNpilot_cont_500_bf_scaffold_56869
Species: Legionella pneumophila (50%)
2 1175 bp 35.74 3.40 62.55
SCNpilot_cont_500_bf_scaffold_22497
Species: Legionella drancourtii (100%)
2 2451 bp 40.02 4.28 98.90
SCNpilot_cont_500_bf_scaffold_51397
Species: Legionella fallonii (50%)
2 2117 bp 35.29 3.90 69.30
SCNpilot_cont_500_bf_scaffold_51653
Species: Legionella fallonii (50%)
2 1272 bp 38.92 4.52 35.14
SCNpilot_cont_500_bf_scaffold_45190
Species: Legionella hackeliae (50%)
2 1418 bp 41.04 5.11 95.42
SCNpilot_cont_500_bf_scaffold_61383
Species: Legionella fallonii (50%)
2 1098 bp 42.71 2.73 53.01
SCNpilot_cont_500_bf_scaffold_43451
Species: Legionella longbeachae (100%)
2 1464 bp 40.98 3.42 92.42
SCNpilot_cont_500_bf_scaffold_35956
Species: Coxiella burnetii (50%)
2 1704 bp 39.44 3.37 76.06
SCNpilot_cont_500_bf_scaffold_53545
Species: Legionella fallonii (50%)
2 1237 bp 35.08 3.44 94.34
SCNpilot_cont_500_bf_scaffold_28333
Species: Legionella fallonii (50%)
2 2055 bp 37.42 3.77 70.80
SCNpilot_cont_500_bf_scaffold_42901
Species: Legionella longbeachae (50%)
2 1479 bp 36.92 4.90 92.90
SCNpilot_cont_500_bf_scaffold_48465
Species: Legionella drancourtii (100%)
2 1338 bp 38.64 3.18 80.49
SCNpilot_cont_500_bf_scaffold_40510
Species: Legionella parisiensis (100%)
2 1550 bp 41.81 3.55 99.29
SCNpilot_cont_500_bf_scaffold_27142
Species: Tatlockia micdadei (50%)
2 2126 bp 38.76 4.23 94.40
SCNpilot_cont_500_bf_scaffold_49354
Species: Legionella drancourtii (50%)
2 1319 bp 37.53 3.79 90.75
Displaying items 551-600 of 1020 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.