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SCNPILOT_CONT_500_BF_Legionella_38_4

In projects: SCNPILOT_CONT_500_BF

Consensus taxonomy: Legionella  →  Legionellales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_500_bf_UNK

Properties

Avg. coverage: 3.96 Longest contig: 14.82 Kbp Bin length: 2.20 Mbp GC content: 38.42 %
Contigs count: 1020 Features count: 2836 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 34 / 55 MC: 2 BSCG 33 / 51 MC: 3 ASCG 9 / 38

Description

from TS-ESOM, added from ggkbase

Displaying items 151-200 of 1020 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_36205
Species: Legionella pneumophila (100%)
1 1695 bp 42.95 3.39 99.82
SCNpilot_cont_500_bf_scaffold_49526
Species: Tatlockia micdadei (100%)
2 1315 bp 37.19 3.23 93.76
SCNpilot_cont_500_bf_scaffold_48639
Species: Legionella drancourtii (100%)
2 1333 bp 39.53 3.75 85.75
SCNpilot_cont_500_bf_scaffold_50503
Species: Legionella massiliensis (50%)
2 1295 bp 35.60 4.25 91.04
SCNpilot_cont_500_bf_scaffold_29604
Species: Legionella longbeachae (50%)
2 1988 bp 41.60 3.14 99.45
SCNpilot_cont_500_bf_scaffold_43116
Species: Legionella longbeachae (100%)
2 1472 bp 41.78 2.55 97.42
SCNpilot_cont_500_bf_scaffold_47088
Species: Legionella norrlandica (100%)
2 1372 bp 37.76 3.83 91.40
SCNpilot_cont_500_bf_scaffold_34013
Species: Coxiella burnetii (50%)
2 1783 bp 59.73 5.47 90.19
SCNpilot_cont_500_bf_scaffold_65361
Species: Legionella pneumophila (50%)
2 1031 bp 37.05 4.12 68.09
SCNpilot_cont_500_bf_scaffold_35110
Species: Legionella pneumophila (50%)
2 1739 bp 43.07 3.88 99.89
SCNpilot_cont_500_bf_scaffold_12894
Species: Legionella longbeachae (100%)
2 3695 bp 39.62 3.79 89.88
SCNpilot_cont_500_bf_scaffold_65106
Species: Legionella longbeachae (50%)
2 1035 bp 42.42 3.38 91.01
SCNpilot_cont_500_bf_scaffold_34015
Species: Legionella pneumophila (50%)
2 1783 bp 38.98 3.22 89.18
SCNpilot_cont_500_bf_scaffold_63299
Species: Legionella longbeachae (100%)
2 1065 bp 37.93 2.82 85.63
SCNpilot_cont_500_bf_scaffold_35368
Species: Legionella longbeachae (100%)
2 1728 bp 38.89 4.48 83.51
SCNpilot_cont_500_bf_scaffold_12640
Species: Legionella pneumophila (100%)
2 3757 bp 37.42 6.06 86.80
SCNpilot_cont_500_bf_scaffold_15721
Species: Legionella hackeliae (50%)
2 3200 bp 36.25 3.75 91.59
SCNpilot_cont_500_bf_scaffold_33537
Species: Legionella longbeachae (50%)
2 1801 bp 36.48 3.19 93.11
SCNpilot_cont_500_bf_scaffold_41665
Species: Legionella longbeachae (50%)
2 1514 bp 37.38 4.29 93.33
SCNpilot_cont_500_bf_scaffold_54445
Species: Legionella longbeachae (50%)
2 1221 bp 41.20 3.89 101.47
SCNpilot_cont_500_bf_scaffold_34275
Species: Legionella drancourtii (50%)
2 1773 bp 35.93 4.94 93.23
SCNpilot_cont_500_bf_scaffold_42571
Species: Legionella longbeachae (100%)
2 1488 bp 40.59 2.52 94.15
SCNpilot_cont_500_bf_scaffold_63815
Species: Legionella longbeachae (50%)
2 1057 bp 35.67 3.55 75.78
SCNpilot_cont_500_bf_scaffold_29868
Species: Legionella longbeachae (100%)
2 1974 bp 38.25 3.80 78.12
SCNpilot_cont_500_bf_scaffold_42573
Species: Legionella hackeliae (100%)
2 1488 bp 35.28 2.52 83.87
SCNpilot_cont_500_bf_scaffold_33542
Species: Legionella hackeliae (50%)
2 1801 bp 34.59 2.64 77.12
SCNpilot_cont_500_bf_scaffold_9310
Species: Legionella drancourtii (50%)
2 4677 bp 36.26 3.74 91.92
SCNpilot_cont_500_bf_scaffold_29102
Species: Tatlockia micdadei (50%)
2 2014 bp 35.80 4.22 99.50
SCNpilot_cont_500_bf_scaffold_28775
Species: Legionella pneumophila (100%)
2 2031 bp 36.09 4.92 89.51
SCNpilot_cont_500_bf_scaffold_49795
Species: Legionella drancourtii (50%)
2 1310 bp 37.33 3.63 93.44
SCNpilot_cont_500_bf_scaffold_15984
Species: Legionella longbeachae (50%)
2 3163 bp 36.36 3.71 79.58
SCNpilot_cont_500_bf_scaffold_30752
Species: Legionella longbeachae (100%)
2 1927 bp 40.69 4.28 91.39
SCNpilot_cont_500_bf_scaffold_42832
Species: Legionella drancourtii (50%)
2 1481 bp 38.22 4.90 69.07
SCNpilot_cont_500_bf_scaffold_42321
Species: Legionella pneumophila (50%)
2 2169 bp 38.87 4.26 99.72
SCNpilot_cont_500_bf_scaffold_39554
Species: Legionella drancourtii (50%)
2 1579 bp 39.01 3.64 83.03
SCNpilot_cont_500_bf_scaffold_62272
Species: Legionella longbeachae (100%)
2 1082 bp 31.79 3.70 99.54
SCNpilot_cont_500_bf_scaffold_34028
Species: Legionella longbeachae (100%)
2 1782 bp 36.92 3.37 96.30
SCNpilot_cont_500_bf_scaffold_60940
Species: Legionella longbeachae (100%)
2 1105 bp 42.71 4.07 100.18
SCNpilot_cont_500_bf_scaffold_45640
Species: Legionella longbeachae (50%)
2 1406 bp 45.38 3.02 92.82
SCNpilot_cont_500_bf_scaffold_55473
Species: Legionella longbeachae (50%)
2 1201 bp 38.47 3.54 89.18
SCNpilot_cont_500_bf_scaffold_62275
Species: Legionella longbeachae (50%)
2 1082 bp 39.93 4.62 84.84
SCNpilot_cont_500_bf_scaffold_58499
Species: Legionella longbeachae (50%)
2 1147 bp 37.05 3.71 90.50
SCNpilot_cont_500_bf_scaffold_43648
Species: Legionella massiliensis (50%)
2 2690 bp 39.52 4.74 61.34
SCNpilot_cont_500_bf_scaffold_45900
Species: Legionella pneumophila (100%)
2 1401 bp 35.33 3.57 85.01
SCNpilot_cont_500_bf_scaffold_55479
Species: Legionella pneumophila (50%)
2 1201 bp 39.97 3.33 79.43
SCNpilot_cont_500_bf_scaffold_41684
Species: Legionella longbeachae (100%)
2 1514 bp 39.70 3.30 88.18
SCNpilot_cont_500_bf_scaffold_47112
Species: Legionella fallonii (50%)
2 1371 bp 42.30 2.92 71.99
SCNpilot_cont_500_bf_scaffold_64953
Species: Legionella longbeachae (50%)
2 1038 bp 39.79 4.58 67.05
SCNpilot_cont_500_bf_scaffold_56563
Species: Legionella pneumophila (50%)
2 1180 bp 36.53 2.75 92.54
SCNpilot_cont_500_bf_scaffold_73640
Species: Legionella longbeachae (100%)
2 1547 bp 41.95 3.56 100.65
Displaying items 151-200 of 1020 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.