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SCNpilot_cont_500_bf_scaffold_6075_6

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(4781..5482)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0003026509 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 235.0
  • Bit_score: 354
  • Evalue 6.20e-95
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36182.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 236.0
  • Bit_score: 348
  • Evalue 8.10e-93
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 231.0
  • Bit_score: 272
  • Evalue 1.30e-70

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCAAAACTTCCGCTCATCGACATTCGCCCGGCCGATAAATCCAGCCGCTCCCGGAAGACGACGCCAAGCCGTGCGTCCGCCGCACGTCCCACCAAGCGCGCGATCGGCGCCACCGAGCGCCGCGCGGCCATCGTGGCGGCCGGGCTTGATGAATTCACCGCCAAGGGATTCGCGGCGACGCGCCTCGACGATGTGGCCAAACGCGCCGGCGTCGCCAAGAGCACGATCTATCTGCACTTCAAGGACAAGGAAGCGCTGTTTCAGGAACTGGTGCGCACGGCGCTAGGCCCGCTGGTCCTGAGAGTCTCAAATCCTCCGATCGGCGAGGGAGCAGCTTCGGCGCGCGCGCTGATGGAAGGCTTGGCGGACATGTTCGTGCGCGAGGTGATCGGCACCAGGCGCGGCGACATCCTGCGCCTGATTATTTCAGAAGGCGGGCGCTTCCCTGTGCTTTCGGACTTCTACTACAACGAAGTCATTGCCCACGGTATCGTCGGAATGCGCAAGCTGATCGACTACGGCGTGGCGCGCGGCGAAATCCGCAATCCCCATGTGGCCGAATTTCCGCAACTGATCGCTGCGCCGCTCGTTGTCGCTGTGATCTGGCAGGGCCTGTTCGCCAAGCACCAGCCGCTCGATTTTGCGGCGATGCTGCGGGTTCATCTCGATCTGATTTTTAATGAAGGGAAAGCGGCATGA
PROTEIN sequence
Length: 234
MAKLPLIDIRPADKSSRSRKTTPSRASAARPTKRAIGATERRAAIVAAGLDEFTAKGFAATRLDDVAKRAGVAKSTIYLHFKDKEALFQELVRTALGPLVLRVSNPPIGEGAASARALMEGLADMFVREVIGTRRGDILRLIISEGGRFPVLSDFYYNEVIAHGIVGMRKLIDYGVARGEIRNPHVAEFPQLIAAPLVVAVIWQGLFAKHQPLDFAAMLRVHLDLIFNEGKAA*