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SCNpilot_cont_500_bf_scaffold_6102_10

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 5914..7650

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD2 components n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK0_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 578.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 578.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 578.0
  • Bit_score: 1096
  • Evalue 0.0

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGACACGCGACGACGATTTCCGTGTCCGCCCAGGCCGCATCCGCTCATCGCGAGCGCAGCGCGCCTTGCCCTTCGTCGCGCAGGCGCTCGCCGCCGCGCAGAAGGCCGGGGGCCGCATCTCGCGCTCCGGCAAGATCACCTCGGGCCGCGGGCCGCATTTCGCCCGCGGCCGCGTCGCGAGTATCCGTGCCAATCGCCTCATCACCAGCCGCACGCGCTTCTGCACCGTCAAGGCGCTCGTGGTTCGCAACAAGGGTCAACGCGGTCCGCTCGCCCGCCACCTCAACTACCTTCGTCGCGACGGCGTCACCCGTGACGGCGCGCGCGCGAAGATGTTCGGCGCCGAGACCGACGACGCCAACGTCAAGGAGTTCACCGAGCGCTGCAAGGATGACCGCCACCACTTCCGCTTTATCGTGTCCCCCGAGGACGCGGGCGACATGGAAGATCTGAAGCGGTTCACCCGCGAGCTGATGACGCAGATGGAAAAGGACCTCGGCACGAAACTGGAGTGGGTCGCCGTCGATCATTGGAACACGGATAACCCCCATGCCCATGTCATCGTGCGCGGCCGTGCCGACGATGGCCGCGACCTCGTGATCGACCGCGACTACATCAAGAGCGGGATGCGCGATCGTGCGCAGGATCTCATCACCCAGGAACTCGGCCCGCGCACCGATCTCGACATCAGCCGTGCGTTGAACCGTCAGGTCGAGGCCGAGCGCTGGACCCAGCTCGACCGGCAGCTTGTCCGCGACGCCAACGAGCAGGGCGTCATCGACGTGGCGCCGTCACCGGATCGGCAGCCCGACGCATACCTGACGCAGAAGGTCGGGCGCCTGCGCCACCTCGAACACCTTGGCCTGGCGGAGACCATCGGTCCCGGCCAGTGGGTCATGGCCAAGGAGGCGGAATCGACGCTGCGCGAACTTGGGGCACGCAACGACATCATCAAGCGGATGCACCGCGCGCTCGACGAGCAGGGCATCGCGCGCGGCGCGGCCGACTATGTCCTGGCCGGCGAGGCGCACGGCTCCCCGGTCATCGGCCGGCTGGTTGAACGCGGCCTCGACAACGAGTTGGTTGGGACGGCCTATGCCGTGGTGGATGGCGTCGACGGCCGCACGCACCACATCAAGCTGCCGGACATCGAGTCGGCCGGCGACAGCGCGCCGGGCTCGATCGTGGAATTACGATCCTTCGAGGACGCGAAGGGCGATCGGCGCGTGGCGCTGGCGACGCGCTCCGATCTGTCGATCGAAGCCCAGACCACGGCGAACGGTGCAACCTGGCTCGACCGTCAGCTTGTCGCGCGCGATCCCGTCGATCTCGGCGGCGGCTTCGGTTTGGAGGTGAAGCAGGCGATGGAGGCCCGCGCCGGACACCTAGTGCAGGAGGGGATGGCGCGGCGGGAGGGCGAACGCATCCTGTTCAATCGGAACCTCATCGGCACGCTCCGGCAACGCGAGCTGGATGCATTGAGCGACAGGCTCGCGGCCGAGACCGGGGAGCCGTTTCAGAAATCCGCTGACGGCGAATTTGTCGCCGGCACCTACAGCCGACGCTTCGCGCTGGCCTCCGGCCGCTTCGCCATGATCGACGACGGGCTCGGGTTCAAGCTCGTGCCCTGGACGCCCTCGATCGAGAAGCACATCGGCCAGCACATTTCCGGGGTGGCTCGTGCCGACGGCGGTGTGGATTGGTCTTTCGGCCGTAAACGGGGGCTGGGGCTGTGA
PROTEIN sequence
Length: 579
MTRDDDFRVRPGRIRSSRAQRALPFVAQALAAAQKAGGRISRSGKITSGRGPHFARGRVASIRANRLITSRTRFCTVKALVVRNKGQRGPLARHLNYLRRDGVTRDGARAKMFGAETDDANVKEFTERCKDDRHHFRFIVSPEDAGDMEDLKRFTRELMTQMEKDLGTKLEWVAVDHWNTDNPHAHVIVRGRADDGRDLVIDRDYIKSGMRDRAQDLITQELGPRTDLDISRALNRQVEAERWTQLDRQLVRDANEQGVIDVAPSPDRQPDAYLTQKVGRLRHLEHLGLAETIGPGQWVMAKEAESTLRELGARNDIIKRMHRALDEQGIARGAADYVLAGEAHGSPVIGRLVERGLDNELVGTAYAVVDGVDGRTHHIKLPDIESAGDSAPGSIVELRSFEDAKGDRRVALATRSDLSIEAQTTANGATWLDRQLVARDPVDLGGGFGLEVKQAMEARAGHLVQEGMARREGERILFNRNLIGTLRQRELDALSDRLAAETGEPFQKSADGEFVAGTYSRRFALASGRFAMIDDGLGFKLVPWTPSIEKHIGQHISGVARADGGVDWSFGRKRGLGL*