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SCNpilot_cont_500_bf_scaffold_7312_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 1..588

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 195.0
  • Bit_score: 366
  • Evalue 3.20e-98
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 195.0
  • Bit_score: 344
  • Evalue 2.90e-92
Transcription-repair-coupling factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLQ1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 195.0
  • Bit_score: 366
  • Evalue 2.30e-98

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GGCAATCTGCTCGGCGAGGAACAGTCCGGCCATATCAAGGAAGTCGGTTTCGAGCTGTACCAACAGATGCTTGAGGAGGCGATCGTCTCGCTCAAGGCTGGTATCTCCGAGCCTGTCGCGGACCGCTGGTCGCCGCAGATCACCCTCGGCATGCCGGTGCTGATTCCGGAGGATTATGTCGCGGACCTTGCGATCCGGCTGTCGCTCTATCGGCGTCTGGCCGATCTCGACACCGACGAGGAGATCGAGAACTTCGGAGCGGAGTTGCGCGACCGTTTCGGCCCGCTGCCGGACGAGGTGCGCTGGCTGTTCAAGGTCGCGGCCGTCAAGGCCTATTGCCGCCGCGCCAATGTCGAGAAGGTCGATGCCGGGCCGAAGGGCGCGGTCATCAGCTTCCGCGACAACGCCTTCGCCCAGCCCGAGAAGCTGGTGCATTTCATCCGCCAGCACGGACAGGCTGCGAAGGTGCGCCCCGACATGAAGGTGGTGTTCTTCCAGGAATGGGAAACCGCGGAGGAACGTGTTGAAGGCGCGACCACGATCCTGCGCGATCTGGCCAATCTCGCCGAAGGCAAGAAGGCGGCGTAG
PROTEIN sequence
Length: 196
GNLLGEEQSGHIKEVGFELYQQMLEEAIVSLKAGISEPVADRWSPQITLGMPVLIPEDYVADLAIRLSLYRRLADLDTDEEIENFGAELRDRFGPLPDEVRWLFKVAAVKAYCRRANVEKVDAGPKGAVISFRDNAFAQPEKLVHFIRQHGQAAKVRPDMKVVFFQEWETAEERVEGATTILRDLANLAEGKKAA*