ggKbase home page

SCNpilot_cont_500_bf_scaffold_19302_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 1..885

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 295.0
  • Bit_score: 559
  • Evalue 3.80e-156
phosphomethylpyrimidine synthase n=1 Tax=Afipia birgiae RepID=UPI0002E6C53D similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 295.0
  • Bit_score: 560
  • Evalue 9.40e-157
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 295.0
  • Bit_score: 555
  • Evalue 7.30e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
CACAAGGAAAGCTTCCTCTACACGCACTTCGAAGAGATTTGCGACCTGATGCGGAAATACGACGTGTCGTTCTCGCTCGGCGATGGTCTGCGCCCCGGCTCGATCGCCGACGCCAACGACCGCGCGCAATTCGCCGAACTGGAGACGCTCGGCGAACTGACGCAGATCGCCTGGAAGAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGATCAATATGGACAAGCAGCTCAAGGAATGCGGCGAAGCGCCGTTCTACACCCTCGGGCCGCTGATCACCGACATCGCGCCGGGCTACGATCACATCACCTCCGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTGACGCCGAAGGAGCATCTCGGCCTGCCGAACCGCGACGACGTCAAGGTTGGCGTCATCACCTACAAGATCGCGGCCCACGCCGCCGATCTCGGCAAGGGCCATCCCGCCGCGCAACTGCGCGACGACGCGCTGTCGCGTGCACGCTTCGACTTCCGCTGGCAGGATCAGTTCAACCTCGGCCTCGATCCCGACACCGCGATGGCGTTCCACGACGAAACGCTGCCGAAGGACGCGCACAAGGTGGCGCACTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACTGCCGATGTGCGGGAGTACGCGGCGTCGCTCGGTGACAATGAGAAGGCCGCGCTCAACCTCGGTGGCCCAGCGAGCGTCGGCATGTCGATAAAGGGCGTTGTCGAGGACGGCATGGCGCAGATGTCGAAGAAGTTTCTCGACATGGGCGGCGATGTCTATGTCGAAGCGGACGCCGTGAAAGAAAGTAACAAGGCGTTGTAA
PROTEIN sequence
Length: 295
HKESFLYTHFEEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTQIAWKKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLITDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRDDVKVGVITYKIAAHAADLGKGHPAAQLRDDALSRARFDFRWQDQFNLGLDPDTAMAFHDETLPKDAHKVAHFCSMCGPKFCSMKITADVREYAASLGDNEKAALNLGGPASVGMSIKGVVEDGMAQMSKKFLDMGGDVYVEADAVKESNKAL*