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SCNpilot_cont_500_bf_scaffold_30346_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 682..1317

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002D74224 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 211.0
  • Bit_score: 364
  • Evalue 7.10e-98
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39774.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 202.0
  • Bit_score: 360
  • Evalue 1.40e-96
TetR family transcriptional regulator; K09017 TetR/AcrR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 209.0
  • Bit_score: 290
  • Evalue 4.10e-76

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGCCCGCAAACGCGCCAACGACTACGACGACAAGCGGCAGGCGATCCTCGATCGCTCGGCGGAGCTGTTCTCGGCCTATGGCTACGACCGCGCATCAATGAGCAAGATCGCCGATGCCTGCGGCGTATCGAAAGCGAACCTCTATCATTACTACAAGGACAAGGAAGGTCTGCTGTTCGACGTCATCCGCTTCCATCTCGAGGAATTGCTGGAAGTCGTCGAGAGCGCGGACAATCCCGATGCGCAACCTGAAGTACGCCTCAACGGATTGATCGCCGCCCTGCTCGAAGCCTATCGGGATGCGGATTCCCAGCACAACGTGCAGATCAGCAGCATGCGCTTCCTGCCGGATGAACGTCAGGCGCAGCTCAAGGCGATGGAGCGCGATCTGGTGAAGATATTTTCGGCGGCCGTCGTCGGCGTGGCGCCACATCTGAAGGGCACCAAGATGATGACGCCGGTGACTATGTCGCTGTTCGGCATGGTCAACTGGCACTACCTCTGGTTCAGGAGCACCGGCTCCGTCAGCCGGAGCGAATATGCCGAGATCGTGACGCGCCTGATCACCGATGGCGCGCGCAACCTGCTCAAGCCTGCTCCGAAGCAGATGAAACGGACCGCAGCAGCCGAATAA
PROTEIN sequence
Length: 212
MARKRANDYDDKRQAILDRSAELFSAYGYDRASMSKIADACGVSKANLYHYYKDKEGLLFDVIRFHLEELLEVVESADNPDAQPEVRLNGLIAALLEAYRDADSQHNVQISSMRFLPDERQAQLKAMERDLVKIFSAAVVGVAPHLKGTKMMTPVTMSLFGMVNWHYLWFRSTGSVSRSEYAEIVTRLITDGARNLLKPAPKQMKRTAAAE*