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SCNpilot_cont_500_bf_scaffold_30996_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 3..674

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 223.0
  • Bit_score: 393
  • Evalue 2.10e-106
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 223.0
  • Bit_score: 361
  • Evalue 1.50e-97
tRNA pseudouridine synthase A n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6T1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 223.0
  • Bit_score: 393
  • Evalue 1.50e-106

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
AAGGGGCCGTCGGTGCAGGGCGCGCTGGAAGCTGCCGTGACGGCGATGACGGGCGAGATGGTGCGTGTCAGCGGCGCGGGGCGTACCGATGCCGGTGTGCATGCGCTGGGGCAGGTGGCGCATATCGATCTCACAAAATCCTACAGTGCGGATCGCGTGCGTGATGCGCTCAACGCGCATGTGCGGCCGCATCCCATCGCCGTGCTTTCGGCTGAGGTGGTGCCGGACACATTCGATGCGCGGTTTTCCGCGACCAAGCGACATTATATCTACCGCATCGCCAACCGCCGTTCCAATCTGGCGCTGAGCGCAGGCCATGTCTGGCGTGTGCCGCGCCATCTCGACGTGGACGCCATGCATGACGCCGCGCAGGTTCTGGTCGGCAAGCATGACTTCACGACATTCCGCGACACCGAGTGTCAGGCCAAGTCGCCGGAAAAAACGCTCGAAACGCTGAACGTGACGCGCGATGGCGAGAACGTGAACATCACCACCTCCGCGCGCTCGTTCCTGCACAGCCAGGTGCGCTCGATGGTCGGCTCGCTGGTGTGGGTCGGGCATGGCCGCTGGAGCGCGGCCGACATGCGCCGCGCGCTCGAAGCGAAGGATCGCGCGGCCTGCGGTCCCGTCGCGCCGCCGGACGGACTTTATCTGGTGCGGGTGGAGTATTGA
PROTEIN sequence
Length: 224
KGPSVQGALEAAVTAMTGEMVRVSGAGRTDAGVHALGQVAHIDLTKSYSADRVRDALNAHVRPHPIAVLSAEVVPDTFDARFSATKRHYIYRIANRRSNLALSAGHVWRVPRHLDVDAMHDAAQVLVGKHDFTTFRDTECQAKSPEKTLETLNVTRDGENVNITTSARSFLHSQVRSMVGSLVWVGHGRWSAADMRRALEAKDRAACGPVAPPDGLYLVRVEY*