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SCNpilot_cont_500_bf_scaffold_32592_2

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 743..1201

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0Z8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 152.0
  • Bit_score: 274
  • Evalue 9.10e-71
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 152.0
  • Bit_score: 274
  • Evalue 1.30e-70
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 152.0
  • Bit_score: 253
  • Evalue 3.10e-65

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATCCCGGCCCTGCGGCGCTATGCCCGCGCGCTGGCGCGGGACCGCGATATCGCCGACGATCTGGTGCAGGATACGCTGGTCCGCGCGCTGAGGTCGGAAAAGCTGTTTCTGGGTGGCGACCTGCGGGCATGGCTTTACACCATCCTGACCAACCTCAATCGCAACCGCCGCCGCTCGCTGGCGCGGCAACCGACGATGATGGAACTGCACGACACGAACGCGGACGCATCCGGCACGGAAGCGGAAGGCCGCGATATTTCCCGGGCGCTGCTGACATTGCCGGAGGACCAGCGCGCGGTTCTCCTGCTGGTGGTGCTGGAAGGACTGAGCTATCGCGATGTCGCCGATATTCAGGGCGTCCCCATCGGCACCGTGATGTCGCGCCTCGCCCGTGCGCGGGCGCAGGTCAAGGCGATGCTCGAAGGCGAGCGGCCGATGCTGCGGCGGGTGAAATGA
PROTEIN sequence
Length: 153
MIPALRRYARALARDRDIADDLVQDTLVRALRSEKLFLGGDLRAWLYTILTNLNRNRRRSLARQPTMMELHDTNADASGTEAEGRDISRALLTLPEDQRAVLLLVVLEGLSYRDVADIQGVPIGTVMSRLARARAQVKAMLEGERPMLRRVK*