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SCNpilot_cont_500_bf_scaffold_33856_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(300..686)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QF58_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 128.0
  • Bit_score: 221
  • Evalue 5.90e-55
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 128.0
  • Bit_score: 221
  • Evalue 1.90e-55
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACE99492.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 128.0
  • Bit_score: 221
  • Evalue 8.30e-55

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGCCCGCCAGTTGATTTCCACCGGATCGCCGTTTGAGAAGACCGCCGGCTACAGCCGCGCCGTTGTTGACGGCGACTTCATGTTTGTCTCCGGCACCACCGGCTACGACTACACGACGATGACGCTTCCCGAAGACGTTACCGCGCAAGCCACCAACTGCTTCAAGACCATCGGCGGCGTGCTGGAAGGTGCGGGCTTCGCGATGGCCGATATCGTGCGTGCAACCTACTATATCGTCGACCCGGCCGATGCCGACGCGGTGTTCGCGGTCTGCGGCCGGCATCTCGGCGAAATCCGTCCCGCCGCCACGCTCCTGGTGGTCGCAGCCCTGCTCAAGCCTGAGATGAAGATCGAAATCGAAGTTACGGCGAAACGCCGAAGCTGA
PROTEIN sequence
Length: 129
MARQLISTGSPFEKTAGYSRAVVDGDFMFVSGTTGYDYTTMTLPEDVTAQATNCFKTIGGVLEGAGFAMADIVRATYYIVDPADADAVFAVCGRHLGEIRPAATLLVVAALLKPEMKIEIEVTAKRRS*