ggKbase home page

SCNpilot_cont_500_bf_scaffold_33856_3

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: comp(1468..1788)

Top 3 Functional Annotations

Value Algorithm Source
ornithine decarboxylase (EC:4.1.1.17); K01581 ornithine decarboxylase [EC:4.1.1.17] similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 106.0
  • Bit_score: 214
  • Evalue 1.40e-53
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHQ0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 106.0
  • Bit_score: 221
  • Evalue 4.90e-55
Uncharacterized protein {ECO:0000313|EMBL:EKS41076.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 106.0
  • Bit_score: 221
  • Evalue 6.90e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATCTCGAAGAAGAGCGACGACGACGAGAACCGCTGGGTCTATCTCGACATCGGCAAGTTCGGCGGCCTCGCCGAGACGATGGACGAGTCGATCCGCTACGCCATCAGGACGCCGCACGACGGCGCGGAGATGGCGCCGTGCATCCTCGCCGGCCCGACCTGCGATTCGGCCGACGTGCTGTACGAAAAGGTGCCGTATCCGCTGCCCGTCACGCTTGAGATCGGCGACAAGCTGCTGATCGAAGGCACCGGGGCGTATACCTCGACCTACTCGTCGGTGGCCTTCAACGGCATCCCGCCGCTGAAGACCTATCACATCTGA
PROTEIN sequence
Length: 107
ISKKSDDDENRWVYLDIGKFGGLAETMDESIRYAIRTPHDGAEMAPCILAGPTCDSADVLYEKVPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGIPPLKTYHI*