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SCNpilot_cont_500_bf_scaffold_36735_1

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 2..484

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 155.0
  • Bit_score: 247
  • Evalue 7.30e-63
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI51262.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 155.0
  • Bit_score: 247
  • Evalue 1.00e-62
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 155.0
  • Bit_score: 246
  • Evalue 5.10e-63

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GAAGCGTTGATCGAACGCGTCTATGAGGAAGTCTTCCTCAGCCGTTGGTCGCCCTCGTGGAGCGCCCTGATCCGCGATCGCAATCTGTCGTTCGAGGAACGGCTGAACCGCTTCTATCTCGAATACGTCGAACGCGTGTTCGAATACAACTGGGTGCGCATCTTCGTCTTTTCAGGGATGAAGTCGTTCAACATCACAGGGCGCTATCTGGATATCGTCAGGAAAGAGATTATCGAGCCGGCCTGCAACGAATTGCGCCACGATCTCGGCTTGCCATCCAGCGAAATTGTGCCGCTGTCCGAGCGCGAAACGGAGATGTTTTGGGGCCTGCACGGTCGTATCTTCTATATCGCGATCCGCCGCTATGTTTATGCGACGCCGACCCCCGATCATCTCGACGACATTGTCCGAGATGCCATCACCGCCTTCCTCGACGGATCGAAAGCGCTGATGCCGAAACTGGTGCCGCCACCCGCGCAATAG
PROTEIN sequence
Length: 161
EALIERVYEEVFLSRWSPSWSALIRDRNLSFEERLNRFYLEYVERVFEYNWVRIFVFSGMKSFNITGRYLDIVRKEIIEPACNELRHDLGLPSSEIVPLSERETEMFWGLHGRIFYIAIRRYVYATPTPDHLDDIVRDAITAFLDGSKALMPKLVPPPAQ*