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SCNpilot_cont_500_bf_scaffold_57566_3

Organism: SCNPILOT_CONT_500_BF_Afipia_63_5

partial RP 23 / 55 MC: 10 BSCG 23 / 51 MC: 9 ASCG 8 / 38 MC: 4
Location: 1111..1323

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=10 Tax=Bradyrhizobiaceae RepID=B6JJC2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 5.00e-32
hypothetical protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 1.60e-32
Cold shock protein CspA {ECO:0000313|EMBL:EKS32586.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 7.10e-32

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
GTGAGCATGGGAACTGTGAAGTGGTTCAACGCGACCAAGGGCTACGGATTTATTCAGCCGGACGATGGCGGCAACGACGTGTTCGTTCACATCAGCGCTGTTGAGCGCGCCGGCCTCGGCACGCTGCGCGAAGGCCAGAAGATCAGCTACGAAATCGTTGCCGATCGCCGTTCGGGCAAGTCGTCGGCCGACAATCTCCGGGCCGCTGGCTAA
PROTEIN sequence
Length: 71
VSMGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*