Consensus taxonomy: Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
from TS-ESOM, added more from ggkbase
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_2134
Order:
Rhizobiales (82.35%)
|
17 | 15762 bp | 59.71 | 24.19 | 87.72 | |
SCNpilot_cont_500_bf_scaffold_2711
Order:
Rhizobiales (90.7%)
|
43 | 39601 bp | 62.90 | 19.25 | 86.56 | |
SCNpilot_cont_500_bf_scaffold_18682
Genus:
Afipia (66.67%)
|
9 | 6967 bp | 63.73 | 9.83 | 96.89 | |
SCNpilot_cont_500_bf_scaffold_934
Class:
Alphaproteobacteria (68.85%)
|
61 | 63570 bp | 70.65 | 8.86 | 87.11 | |
SCNpilot_cont_500_bf_scaffold_34076
Genus:
Afipia (66.67%)
|
3 | 1780 bp | 62.64 | 8.43 | 78.71 | |
SCNpilot_cont_500_bf_scaffold_22993
Genus:
Afipia (60%)
|
5 | 2411 bp | 64.79 | 8.40 | 100.29 | |
SCNpilot_cont_500_bf_scaffold_46016
Species:
Afipia broomeae (50%)
|
2 | 1398 bp | 59.44 | 8.40 | 74.25 | |
SCNpilot_cont_500_bf_scaffold_32484
Genus:
Afipia (50%)
|
6 | 2833 bp | 65.13 | 8.38 | 87.89 | |
SCNpilot_cont_500_bf_scaffold_55692
Species:
Afipia broomeae (100%)
|
2 | 1197 bp | 61.49 | 8.35 | 99.25 | |
SCNpilot_cont_500_bf_scaffold_24199
Species:
Afipia broomeae (50%)
|
2 | 2322 bp | 65.37 | 8.29 | 89.41 | |
SCNpilot_cont_500_bf_scaffold_56289
Species:
Afipia broomeae (100%)
|
1 | 1186 bp | 66.36 | 8.01 | 99.92 | |
SCNpilot_cont_500_bf_scaffold_2020
Genus:
Afipia (50%)
|
16 | 15963 bp | 62.10 | 7.99 | 86.17 | |
SCNpilot_cont_500_bf_scaffold_19302
Species:
Afipia clevelandensis (50%)
|
4 | 2749 bp | 62.17 | 7.91 | 85.23 | |
SCNpilot_cont_500_bf_scaffold_4285
Species:
Afipia broomeae (56.25%)
|
16 | 13990 bp | 64.12 | 7.84 | 80.28 | |
SCNpilot_cont_500_bf_scaffold_63610
Species:
Afipia felis (50%)
|
2 | 1060 bp | 62.92 | 7.78 | 92.55 | |
SCNpilot_cont_500_bf_scaffold_14923
Species:
Afipia broomeae (66.67%)
|
3 | 3319 bp | 62.76 | 7.76 | 95.00 | |
SCNpilot_cont_500_bf_scaffold_23001
Species:
Afipia clevelandensis (66.67%)
|
3 | 2411 bp | 61.88 | 7.67 | 87.47 | |
SCNpilot_cont_500_bf_scaffold_41330
Species:
Afipia clevelandensis (50%)
|
2 | 3230 bp | 66.13 | 7.66 | 88.14 | |
SCNpilot_cont_500_bf_scaffold_36055
Species:
Afipia clevelandensis (50%)
|
2 | 1701 bp | 65.96 | 7.64 | 91.71 | |
SCNpilot_cont_500_bf_scaffold_68565
Species:
Afipia broomeae (50%)
|
2 | 1672 bp | 66.27 | 7.63 | 99.76 | |
SCNpilot_cont_500_bf_scaffold_6441
Species:
Afipia felis (60%)
|
5 | 6205 bp | 61.77 | 7.61 | 98.15 | |
SCNpilot_cont_500_bf_scaffold_20115
Species:
Afipia felis (100%)
|
4 | 2665 bp | 67.73 | 7.60 | 95.91 | |
SCNpilot_cont_500_bf_scaffold_96098
Species:
Afipia clevelandensis (50%)
|
2 | 1329 bp | 59.07 | 7.52 | 43.12 | |
SCNpilot_cont_500_bf_scaffold_63078
Species:
Afipia felis (100%)
|
1 | 1069 bp | 62.02 | 7.48 | 99.91 | |
SCNpilot_cont_500_bf_scaffold_40420
Species:
Afipia clevelandensis (50%)
|
2 | 1552 bp | 61.60 | 7.41 | 79.83 | |
SCNpilot_cont_500_bf_scaffold_52792
Species:
Afipia clevelandensis (100%)
|
1 | 1251 bp | 64.99 | 7.39 | 99.76 | |
SCNpilot_cont_500_bf_scaffold_24462
Species:
Afipia broomeae (66.67%)
|
3 | 2302 bp | 62.08 | 7.38 | 97.48 | |
SCNpilot_cont_500_bf_scaffold_23944
Species:
Afipia broomeae (50%)
|
2 | 2340 bp | 59.06 | 7.37 | 72.18 | |
SCNpilot_cont_500_bf_scaffold_11396
Genus:
Afipia (60%)
|
5 | 4049 bp | 62.46 | 7.35 | 90.76 | |
SCNpilot_cont_500_bf_scaffold_57941
Species:
Afipia felis (50%)
|
2 | 1156 bp | 61.94 | 7.35 | 88.49 | |
SCNpilot_cont_500_bf_scaffold_18912
Species:
Afipia sp. 1NLS2 (50%)
|
4 | 2792 bp | 66.73 | 7.34 | 85.64 | |
SCNpilot_cont_500_bf_scaffold_59769
Species:
Afipia felis (100%)
|
3 | 1125 bp | 64.44 | 7.33 | 100.00 | |
SCNpilot_cont_500_bf_scaffold_20095
Species:
Afipia sp. 1NLS2 (66.67%)
|
3 | 2667 bp | 67.60 | 7.31 | 96.29 | |
SCNpilot_cont_500_bf_scaffold_16434
Species:
Afipia broomeae (75%)
|
4 | 4126 bp | 65.22 | 7.27 | 88.92 | |
SCNpilot_cont_500_bf_scaffold_20180
Species:
Afipia broomeae (50%)
|
2 | 2659 bp | 63.07 | 7.24 | 91.05 | |
SCNpilot_cont_500_bf_scaffold_37753
Species:
Afipia felis (75%)
|
4 | 2796 bp | 61.05 | 7.24 | 85.73 | |
SCNpilot_cont_500_bf_scaffold_28673
Species:
Afipia felis (100%)
|
2 | 2037 bp | 65.73 | 7.24 | 94.85 | |
SCNpilot_cont_500_bf_scaffold_50760
Species:
Afipia sp. P52-10 (50%)
|
2 | 1290 bp | 62.71 | 7.17 | 95.58 | |
SCNpilot_cont_500_bf_scaffold_13491
Species:
Afipia clevelandensis (50%)
|
4 | 5227 bp | 65.60 | 7.17 | 83.11 | |
SCNpilot_cont_500_bf_scaffold_36408
Species:
Afipia broomeae (50%)
|
2 | 1687 bp | 63.31 | 7.11 | 81.80 | |
SCNpilot_cont_500_bf_scaffold_42671
Species:
Afipia sp. 1NLS2 (100%)
|
2 | 1485 bp | 57.44 | 7.07 | 57.17 | |
SCNpilot_cont_500_bf_scaffold_29725
Species:
Afipia sp. P52-10 (50%)
|
2 | 1981 bp | 62.65 | 7.07 | 98.44 | |
SCNpilot_cont_500_bf_scaffold_28378
Species:
Afipia felis (75%)
|
4 | 2053 bp | 64.15 | 7.06 | 86.80 | |
SCNpilot_cont_500_bf_scaffold_12379
Order:
Rhizobiales (85.71%)
|
7 | 6878 bp | 62.11 | 7.05 | 76.20 | |
SCNpilot_cont_500_bf_scaffold_7385
Species:
Afipia broomeae (50%)
|
6 | 5582 bp | 63.36 | 6.99 | 86.74 | |
SCNpilot_cont_500_bf_scaffold_72040
Species:
Afipia clevelandensis (50%)
|
2 | 1432 bp | 63.62 | 6.98 | 99.09 | |
SCNpilot_cont_500_bf_scaffold_67122
Species:
Afipia broomeae (100%)
|
1 | 1005 bp | 62.49 | 6.97 | 99.70 | |
SCNpilot_cont_500_bf_scaffold_64796
Species:
Afipia broomeae (100%)
|
1 | 1041 bp | 63.98 | 6.96 | 84.73 | |
SCNpilot_cont_500_bf_scaffold_27251
Genus:
Afipia (50%)
|
4 | 3591 bp | 65.75 | 6.96 | 69.34 | |
SCNpilot_cont_500_bf_scaffold_23298
Species:
Afipia felis (75%)
|
4 | 2388 bp | 61.89 | 6.91 | 86.56 |