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SCNpilot_cont_500_bf_scaffold_769

Search features with annotation key words

Displaying items 121-150 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_769_119
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120907..121962)
DNA (1056bp) protein (352aa)
TolA, TolA protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M9S3_9RHIZ rbh
TolA, TolA protein {ECO:0000313|EMBL:EKF18891.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TolA, TolA protein
SCNpilot_cont_500_bf_scaffold_769_120
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121975..122427)
DNA (453bp) protein (151aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLG6_9RHIZ
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EHK58364.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
protein TolR; K03560 biopolymer transport protein TolR
SCNpilot_cont_500_bf_scaffold_769_121
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122457..123173)
DNA (717bp) protein (239aa)
biopolymer transporter ExbB n=1 Tax=Hoeflea sp. 108 RepID=UPI00038169D0
Membrane spanning protein in TolA-TolQ-TolR complex {ECO:0000313|EMBL:CDX23376.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
TolQ protein
SCNpilot_cont_500_bf_scaffold_769_122
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123422..123892)
DNA (471bp) protein (157aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Acyl-CoA thioesterase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EZ32_9RHIZ
Acyl-CoA thioesterase {ECO:0000313|EMBL:CCV04811.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_cont_500_bf_scaffold_769_123
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124004..125044)
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction DNA helicase RuvB n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E02EB4
SCNpilot_cont_500_bf_scaffold_769_124
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(125041..125439)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH0_9RHIZ
PilT protein domain protein {ECO:0000313|EMBL:CDN55259.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
putative nucleic-acid-binding protein, contains PIN domain
SCNpilot_cont_500_bf_scaffold_769_125
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125436..125696)
DNA (261bp) protein (87aa)
UPI0003CDDE1F related cluster n=1 Tax=unknown RepID=UPI0003CDDE1F
Uncharacterized protein {ECO:0000313|EMBL:KJS15829.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
Regulators of stationary/sporulation gene expression protein
SCNpilot_cont_500_bf_scaffold_769_126
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125763..126383)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLH2_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_769_127
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126397..126807)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D142_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:KJS15826.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
PilT protein domain-containing protein; K07062
SCNpilot_cont_500_bf_scaffold_769_128
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126809..127060)
DNA (252bp) protein (84aa)
Holliday junction resolvase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D144_9RHIZ
Holliday junction resolvase {ECO:0000313|EMBL:KGF68395.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
AbrB family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_769_129
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127139..127654)
DNA (516bp) protein (172aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3A7_9RHIZ
SCNpilot_cont_500_bf_scaffold_769_130
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127733..128263)
DNA (531bp) protein (177aa)
UPI0003CE4792 related cluster n=1 Tax=unknown RepID=UPI0003CE4792
AraC family transcriptional regulator {ECO:0000313|EMBL:ESW81908.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein; K13592 regulator of CtrA degradation
SCNpilot_cont_500_bf_scaffold_769_131
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128598..130238)
DNA (1641bp) protein (547aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C184DC
Acyl-CoA synthetase {ECO:0000313|EMBL:EHK58376.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_769_132
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130415..131305
DNA (891bp) protein (297aa)
Hydrolase, alpha/beta fold family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTB5_RUEPO rbh
alpha/beta hydrolase rbh
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:AAV94786.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_cont_500_bf_scaffold_769_133
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131323..132093)
DNA (771bp) protein (257aa)
Putative permease n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HLL2_9RHIZ
Putative permease {ECO:0000313|EMBL:KFB08822.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
putative permease
SCNpilot_cont_500_bf_scaffold_769_134
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132285..132950
DNA (666bp) protein (222aa)
Thiamine-phosphate pyrophosphorylase {ECO:0000313|EMBL:ESY18224.1}; EC=2.5.1.3 {ECO:0000313|EMBL:ESY18224.1};; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
UPI0003CF81EF related cluster n=1 Tax=unknown RepID=UPI0003CF81EF
SCNpilot_cont_500_bf_scaffold_769_135
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132947..133915
DNA (969bp) protein (323aa)
Sel1 domain-containing protein repeat-containing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NS36_9RHIZ
Sel1 domain-containing protein repeat-containing protein {ECO:0000313|EMBL:EKF42110.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Sel1 domain-containing protein repeat-containing protein; K07126
SCNpilot_cont_500_bf_scaffold_769_136
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134259..134633
DNA (375bp) protein (125aa)
Elongation factor P n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=EFP_MESSB
elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_769_137
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134747..135550
DNA (804bp) protein (268aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
Inositol monophosphatase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DG8_MESSB rbh
Inositol monophosphatase {ECO:0000313|EMBL:ABG64557.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_769_138
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135568..136905)
DNA (1338bp) protein (446aa)
esterase n=1 Tax=Rhizobium mongolense RepID=UPI0003B75C28
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AJD39846.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
alpha/beta hydrolase family protein
SCNpilot_cont_500_bf_scaffold_769_139
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137149..138156
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLI8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58386.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_769_140
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138157..139185
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C3810
Uncharacterized protein {ECO:0000313|EMBL:CDX25214.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K02557 chemotaxis protein MotB
SCNpilot_cont_500_bf_scaffold_769_141
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139166..139501)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003685E61
UPF0235 protein MPLB_670001 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K09131 hypothetical protein
SCNpilot_cont_500_bf_scaffold_769_142
Siccibacter turicensis, Siccibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139510..139863)
DNA (354bp) protein (118aa)
Mll3930 protein n=1 Tax=Cronobacter turicensis 564 RepID=K8BSY8_9ENTR
Mll3930 protein {ECO:0000313|EMBL:CCJ91497.1}; TaxID=1208590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Siccibacter.;" source="Siccibacter turicensis 564.;"
ypaA; protein YpaA
SCNpilot_cont_500_bf_scaffold_769_143
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140033..141850)
DNA (1818bp) protein (606aa)
Lipid A ABC exporter family, fused ATPase and inner membrane subunits n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJA1_9RHIZ
Lipid A ABC exporter family, fused ATPase and inner membrane subunits {ECO:0000313|EMBL:CCV04784.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_500_bf_scaffold_769_144
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


142029..142250
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MNQ5_9RHIZ
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_cont_500_bf_scaffold_769_145
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142389..142724
DNA (336bp) protein (112aa)
UPI0003CE6B43 related cluster n=1 Tax=unknown RepID=UPI0003CE6B43
Uncharacterized protein {ECO:0000313|EMBL:ESY70102.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_769_146
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142915..143211)
DNA (297bp) protein (99aa)
UPI0003CF1ECC related cluster n=1 Tax=unknown RepID=UPI0003CF1ECC
Uncharacterized protein {ECO:0000313|EMBL:CDX23308.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
selT/selW/selH selenoprotein domain protein
SCNpilot_cont_500_bf_scaffold_769_147
unknown

Not on your lists

comp(143225..143998)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_769_148
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144082..144831)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein MAXJ12_05778 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLZ2_9RHIZ rbh
Probable transcriptional regulatory protein MAXJ12_05778 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
Displaying items 121-150 of 213 in total

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