ggKbase home page
This organism can only be binned in the context of its binning project RAAC. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

SCNpilot_cont_500_bf_scaffold_199_69

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: comp(77496..77759)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B36759 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 59.0
  • Bit_score: 82
  • Evalue 2.20e-13
alcohol dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 58.0
  • Bit_score: 82
  • Evalue 9.20e-14
Alcohol dehydrogenase {ECO:0000313|EMBL:AGB74062.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 58.0
  • Bit_score: 82
  • Evalue 4.10e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGTAAGGATTGGAAAGGAACTCGTCCTTGCGGCCGGCGCGGTGAATTCGCCGCAACTACTTCAGCTTTCGGGGATCGGAGATTCGGATATTCTGAAGCGCCACGGGATCAACATCGTCCACGCCTTGCCGAAGGTTGGGGAGAACCTGCAGGACCATCTCGGATTGAACGCTGTCTCCTTCGTGCTGATGGTCGGCTCGTGCCTGCTGGCGCTGATCAGCGTGCTGGTGCAGCGTGAGCGCAGGACCGGCAAGGAGACGTGA
PROTEIN sequence
Length: 88
MVRIGKELVLAAGAVNSPQLLQLSGIGDSDILKRHGINIVHALPKVGENLQDHLGLNAVSFVLMVGSCLLALISVLVQRERRTGKET*