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SCNpilot_cont_500_bf_scaffold_424_17

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 15084..15593

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 88
  • Evalue 7.90e-15
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 166.0
  • Bit_score: 88
  • Evalue 1.10e-14
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 155.0
  • Bit_score: 81
  • Evalue 3.00e-13

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCCATCAGAGTTCAGAAACGACCTGCTGGCCCTCGTTCCATCGCTGAGGGCATTCGCGTTCTGCCTGACGCAGGACCAGTCCGAGGCGGATGACTTTGTCTACGGATCGTTGATCGAAATCTGGTCGAAGCACCGTTTCAGGAAGGGCATGGAACTTAGAGCAGCGGCCTTCACGGTCGTCGACAGGCAGTGCCGGAGGAGAAACCCGAAGAATCCTTCGTTGGCTCATATACCCGAGGGATCAGGAGCTGGAGGCCGGGAGCGCCTGTTCGCCCTCTTCGAATCCCTGGGACGCAACGAGCGGGAGGCGCTGTCGCTGGTCGTGGTCTGGGGTTTCACCGACGATCAGGCGGCGCGGATTTGCGATATCGACACGCGCACGCTGGGAATTCGTGTCACGAATGCATACCTTCGCCTCGCGCATGGTCTGACGCTGCGACCCTATTTCCCCGGTTCGGACCGTGTAGATATTCGGCTCAAGCAGACGAGGGAACGCTGCCATGGATGA
PROTEIN sequence
Length: 170
MPSEFRNDLLALVPSLRAFAFCLTQDQSEADDFVYGSLIEIWSKHRFRKGMELRAAAFTVVDRQCRRRNPKNPSLAHIPEGSGAGGRERLFALFESLGRNEREALSLVVVWGFTDDQAARICDIDTRTLGIRVTNAYLRLAHGLTLRPYFPGSDRVDIRLKQTRERCHG*