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SCNpilot_cont_500_bf_scaffold_543_11

Organism: SCNPILOT_CONT_500_BF_Mesorhizobium_64_28

partial RP 27 / 55 MC: 1 BSCG 29 / 51 ASCG 10 / 38 MC: 2
Location: 5913..6455

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE1CD8 related cluster n=1 Tax=unknown RepID=UPI0003CE1CD8 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 2.70e-61
RNA polymerase sigma factor {ECO:0000313|EMBL:ESY82822.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 242
  • Evalue 3.70e-61
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 171.0
  • Bit_score: 241
  • Evalue 2.40e-61

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGTAGACTGAAATCCCGTTTCGACATCGTCGGCCAGCTCGGGCATCTGCGGCGGTACGCGCGCACCTTGACGCGCGACGGCGCGGATGCCGAAGACCTCGTGCACGAAACTCTTCTCCGCGCCTATGAACGGCGGAACGGTTTCCGTGCCGGCGGCAATTTGCGCGCCTGGCTGCTCTCGATCCTACACAACACGTATATTGACGGATTCCGCGCCCGCCGGGCCGAGGCGCGCCGCGTGGCGCAAGCTGCGCTGGTTGCGGAGACACAATTCGAAGCACCGCAGGAGCACTCGGTCCGCTTTGCTCAGCTTCGGCGAACTTTCCTTTCGCTGCCGGAGGGGCAGCGGGCTGCGCTCCACCTCGTCGCGATCGAAGGATTATCCTACGAGCAAGCGGCTTCGACGCTTGGGATTCCAACGGGAACGCTGATGTCCCGGCTGGGCCGCGCCCGCGCCAACCTGCGGGCGATGGAGGACAAGGAGCGCCCCATCGGCTCGGAACACCTCAGGATCGTTGGAGGCAGGGATGGATGGGTTTGA
PROTEIN sequence
Length: 181
MGRLKSRFDIVGQLGHLRRYARTLTRDGADAEDLVHETLLRAYERRNGFRAGGNLRAWLLSILHNTYIDGFRARRAEARRVAQAALVAETQFEAPQEHSVRFAQLRRTFLSLPEGQRAALHLVAIEGLSYEQAASTLGIPTGTLMSRLGRARANLRAMEDKERPIGSEHLRIVGGRDGWV*